Phytophthora sojae: PHYSODRAFT_350889
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Entry
PHYSODRAFT_350889 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psoj
Phytophthora sojae
Pathway
psoj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHYSODRAFT_350889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_350889
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-60S particles
RNases
PHYSODRAFT_350889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
20649174
NCBI-ProteinID:
XP_009524998
JGI:
Physo3_350889
UniProt:
G4Z4V2
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MADEDYEDGEILEEGEEVEQVSPSTQSAAPASGASTDAPTISQPALPPVNEALLPTPGST
NPRKRLHSTLQDARVPSSASVYDNRPPLTHRQPARYSSSNNSNNNNGYSDRRPHEHQDDR
VYSEDLIVKYPRQQPHSRVLMDFGAWMAAARSRQRLDVEEVQKLVLNVLRGGSRKEKGRV
SPYLLPSLMPGAELPSKVCVVLLAKMHPSVLQKYRAKLSFFDACSSVPVMLTKQELNQIR
RSEAPLPELMYKFPRPTVDTHELSTDELFYAHELTFLMKHSAGFTDELVFLPTGRFTRKS
QPLGGTWELDGDLLHLKWRQRTTKAAAAGPEETPTDQDTVMEDEEDDAYTLDVLVSQDGS
MHEFRTDPVTDETYAHKVPEHLAKKRRGDDKPRSIWLSLAKAIAVDVPRSADGALILQDK
THVNGSSKQESLPTEMNSNGIKKEEEALKPEAFQYYTLSLEEMKQHGYPTDVEEEQRKLL
ESTEGNARDRYVATKPRPQLAAAGAAPASDGEDDDDDDEEGAAMETDETLANASSSGEFI
YALDCEMCETDIGMELTRVTVVDVKGAVLYDQLVKPQSTIINYHTEFSGISEETLRDTKY
ILADVQRDLVTRFIFEDTILVGHSLTSDLRALRLVHPTIADTSILYPHQRGFPFRTSLKY
LTKTYLKKDIQTQVQDGHDSAEDAIASLELLLLKVREGPWFGIPESVSSSGAFDSIVDKA
FALEKKLTMLRLQSSDKSKQETEKATAERKPWDLYASGDLKAQSQSPFRHAQAVKAKAEE
STSPSPGSAILMVEDCSSWEALKTSLKSALGDQPSEAAPQPDLCWVEIEPPTASAALCND
FVGKHEQWMAEQQTYCEKVDAFLLQVRDEVLPKGTLLLALPQGDLSLLRYLKGLRTRSKW
RDATPSSDDVAPEELHAAVGDAFRGAMDSCLFLMQK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagactacgaagacggcgagatcctagaggagggcgaggaggtcgagcag
gtctctccttctacccagtctgctgcacctgcgtccggcgcttctaccgacgcgccaacc
atctcgcagcccgctctaccgcctgtaaacgaggctctactgcccacgccaggtagcacc
aacccgcgcaagcggctgcactcgacgctacaagacgccagggtgccaagctcagcctca
gtatacgacaaccgcccaccgctgacccaccgccagccagcgcgctacagcagcagcaac
aacagtaacaacaacaatggctacagcgaccgccgaccccacgagcaccaggacgaccgc
gtgtactcggaggatctgatcgtcaagtacccgaggcagcagccgcacagccgcgtgctg
atggactttggcgcgtggatggcggcggccaggagcaggcagcgactggacgtggaggag
gtgcagaagctggtgctcaacgtgctgcgtggaggcagcaggaaggagaagggccgcgtg
agcccctacctgctgccgtccctgatgcccggggcggagctgccctccaaggtctgcgtg
gtgctgctggccaagatgcacccgtcggtgctgcagaagtaccgagccaagctgagcttc
ttcgacgcgtgctcgagcgtgcccgtgatgctgaccaagcaggagctgaaccagatccga
aggtccgaggcgccgctgccggagctcatgtacaagttcccgagacccacagtggacacg
cacgagctgtcgacggacgagctgttctacgcccacgagctgacgttcctgatgaagcac
tcggctgggtttacggacgagctggtgttcctgccgacaggcagatttacacgcaagagt
cagccgcttggagggacgtgggagctggacggagacctgcttcatctgaagtggaggcag
cgcacgacgaaggcggctgcggctgggccggaagagacaccgacggaccaggatacggtg
atggaggacgaggaagacgatgcgtacacgttggacgtgctcgtgagtcaagatggcagc
atgcacgagttcaggacggaccctgtcacggatgagacttatgcccacaaagtgcccgag
catttggccaagaagcggcgcggcgacgataagccacgctccatctggctatcgcttgcg
aaggcgatcgcagtggacgtgccccgatcggccgatggagcgcttattctgcaggacaag
acacatgtgaacggctcgtcgaagcaagaatcactgcccacagaaatgaacagcaatggc
attaagaaggaggaagaggccttgaaaccggaggcgttccagtattacacgctctcactt
gaagagatgaagcagcacggctatccgacggatgttgaagaagagcagcgcaagctcttg
gagtcaactgaagggaatgcacgggaccggtacgtagcgaccaagccgcgacctcagctt
gctgctgcaggtgcagctccagcatcagatggcgaagatgacgacgacgacgacgaagaa
ggagcggctatggagacggatgagactttggctaacgcttcctcgagtggcgagtttatc
tacgctttggactgtgaaatgtgtgagacggacatcggcatggagctcacgcgagtgacg
gtcgtcgacgtcaagggcgccgtcctgtacgaccagctagtgaaaccgcagagcactatc
atcaactaccacacagagttcagtggtatctccgaagagacgttgcgggacacaaagtac
attctggctgacgtgcagcgggatctggtgactcgattcatcttcgaggacacgatcctc
gtgggtcactccttgacaagtgacctgcgtgccctgcgcctggtgcaccctaccatcgcc
gacacgtccattttgtacccccatcagcgcgggttcccattccgcacttctttgaagtac
ctgacgaagacgtatctgaagaaggacatccagacgcaggtccaggatggccacgactcg
gccgaggatgccatcgcgtcgttggagctgctgctactgaaggttcgtgaaggaccttgg
ttcggcattcccgagtcagtctcttcgagcggcgctttcgattccatcgtggacaaagcc
ttcgccttggagaaaaagttgaccatgctgcgcctccaaagctccgataaatccaaacag
gagacagaaaaagctacggcagagcgaaaaccatgggacctgtacgccagcggcgatcta
aaggctcaatcccagagccccttccgtcatgcccaagcagtgaaggctaaagccgaggaa
agcacttcgccatcgccgggcagcgcgatcttgatggtcgaagactgctcgtcatgggag
gctctgaagaccagcctgaagagtgcgctgggtgatcagccgagtgaagccgctccgcag
ccagacctttgctgggtggagattgagcccccgactgcgagtgcagcgctgtgcaacgat
ttcgtcgggaagcacgagcagtggatggccgagcagcagacgtactgtgaaaaggtggac
gcgttcctgctgcaggttcgcgacgaggtgctacccaagggcacgctgctgctggcgctc
ccgcaaggcgatctgagtctgctgcggtatctcaagggcctgcgaacgcgctccaagtgg
cgtgacgctacgcccagcagcgacgatgtagcaccggaagagctgcacgccgcggtgggc
gacgcgttccgaggtgccatggacagctgcctgttcctcatgcaaaagtga
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