Phytophthora sojae: PHYSODRAFT_353490
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Entry
PHYSODRAFT_353490 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
psoj
Phytophthora sojae
Pathway
psoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PHYSODRAFT_353490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_353490
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PHYSODRAFT_353490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
DUF6119
AAA_29
Motif
Other DBs
NCBI-GeneID:
20649383
NCBI-ProteinID:
XP_009515465
JGI:
Physo3_353490
UniProt:
G4YKA6
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MLKVRNSSLAKKAKVVRREVCSLLSIGTNTVSFLDAPISSQDQVSKHLLALKEAFDPTQK
TVRFGVCMVDCSTGAFQLSEFDDTEQRDRLKTLFAQFHIVEIVTERFNISDDTKMTLKHS
APAAIRSSLRVGKEFWGASKTIDEIERAGYFKEHGWPEDVLHFLEVDKGVKPEGQLAISA
LGGCIWHLRRSIIDQELLSLCNFKRYKPSDEEAREARANKEALSAAKAELNQQYVVLDSQ
TIQNLEVLCNSFNGSRSGSLIDIMDKTVTSFGGRMFQEWVLKPLCKIGDIQERLDAVEEL
GNSGDLMMEIREFLRKLPDLERLLSRIHALGSAHRSQEHPDSRAIMYESQTYNIRKIKEF
LSVLNGFDEAMNLTLELGPRLSQSTSPILQSLLKRYQIEDGVQPDIKHGHFPDLTEKLEF
FKRSFDQAAAKKSGVIVPQDGVDPEFDAACADIAQIEAELAEYLKEQRSALRCRDINYWG
KKKEDRYQLEVPESALSKQPKEYELKSRKKGYKRFHTPTIRGLLKRLAAAEDQKEEALKD
QTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSLGLLSSQSEGYTKPEVVAASAANGGTPFI
DIEEGVHPCVAATYGSGDFIPNDAHLGIEGKGQMVLLSGPNMGGKSTLLRQTCVLTLMAQ
IGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLYVELAETATILNHATSHSLVILDEL
GRGTSTFDGTAIAYSVVEHLLSDIQCRTMFATHYHSLVEEYVGNDKVSLGHMGCIVDPEN
DRKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVVECAAKKSEQFERSLQANSHTELETLR
LAQKVKEALEEGEAGVDKLKQLWQEARAAIRASSVGSPIM
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggtgcgcaatagctcgctcgctaaaaaggcgaaggttgttcgccgtgaggta
tgctctctcctgtcgattggtaccaacactgtcagcttcctggacgctccaatctcatct
caggaccaagtgtcgaagcatcttctcgcgctaaaggaggctttcgaccccacacaaaag
actgttcgcttcggcgtttgcatggtggattgctctaccggcgcgttccagctgtccgaa
tttgatgatactgagcagagggaccgtttgaaaacgctatttgctcagtttcacatcgtg
gaaattgtgacagagcgattcaacatttctgatgacacgaagatgaccctcaagcattca
gcacctgctgcgattcgctcgtcactgcgcgtgggaaaggagttttggggtgcttcgaag
accatagatgaaattgagcgtgcggggtactttaaggaacatggatggccggaagacgta
ctgcactttttggaagtggataaaggcgtgaagcccgagggtcaacttgcgatcagtgct
ctgggtggttgcatctggcacctgcgacgtagcattattgaccaagagctgctctccctg
tgcaacttcaagagatacaagccttcggatgaggaggcacgagaagcacgtgcaaacaag
gaagcgctgtccgctgctaaggccgagttaaaccagcagtatgtggtactggactcgcag
actatccaaaatctggaggtgctttgtaacagtttcaacggatcccgctcaggatctctc
atcgatataatggacaagaccgtgacgagctttggtgggcgaatgtttcaggaatgggtg
ctaaaacctttgtgcaagattggcgacattcaagagcgccttgatgccgttgaagagttg
ggcaacagcggcgacttgatgatggaaattcgggagttcctccgcaaattgccagatttg
gagcgtttattgtcgcgaattcatgcgctcggatctgcgcatcgatcccaagaacacccg
gacagccgtgccattatgtacgagtcccagacttacaacatccgaaagatcaaggagttt
ctctctgtcctcaacggctttgatgaagctatgaacctcaccctcgaactggggcctcgc
ctgtcacagtccacctctccaattcttcagtcattgttgaaaaggtaccaaattgaggac
ggcgtccaaccggacattaagcacggacatttccccgatcttacagagaagttggagttc
ttcaagcgcagctttgaccaagcagcagcaaagaagagtggtgtgatcgtgccccaagat
ggtgtggaccccgaatttgatgcagcttgcgctgacatcgctcagatcgaagctgagcta
gcagagtatttaaaggaacagcgcagtgcgcttcgatgccgagacattaactactggggc
aaaaagaaggaggaccgctatcagttggaagttcccgagagcgctttgtcgaagcagccg
aaagagtatgagctgaagtctcgcaagaaggggtacaagcgcttccacactcccacgatt
cgtggcctgttgaaacggttggctgcagcggaggatcaaaaggaggaggcgctaaaggac
cagacacgtcgcatctttcacaagtttgacgaggactacaagtactggatgaaggcggtg
cagtgcttggctgtgttggactgcttggtatcccttggactgctcagcagccaaagtgaa
ggctatacaaaaccggaggtggtggcggcgagcgcagcaaacggaggaacgcctttcatt
gatattgaagaaggtgtgcacccctgtgttgctgcaacttacggcagtggcgacttcatt
ccgaacgatgcgcacctcggtattgaaggtaagggccaaatggttctcctcagtggacca
aacatgggtggtaagtcgacgctgttgcgccaaacgtgcgtactcacgctcatggcccag
atcggaagcttcgttcctgctgccaagtgtcgtctcagccccgtggaccgcattttcacg
cggattggtgcgtctgaccgcatccttgctggccagagtactctttacgtggagctggcc
gagacggcgacgatcctgaaccacgctaccagccactcgctcgtgatcctggacgagttg
ggacgtggtacgtcgacgttcgacggcactgctatcgcgtactcggttgttgagcatttg
ctgagcgacatccagtgtcgaaccatgttcgctactcactaccactcgctggttgaagag
tacgtgggcaacgacaaggtctcattgggccacatgggatgcatcgtcgacccggagaat
gatcgcaaggtcacgttcctgtacaagttggaggacggcatgtgccccaagagctacggc
atcaacgtcgccatgctggccaaactcccggacgaagtggtcgagtgcgctgcgaagaag
tcggagcaattcgagcggtccttgcaggcgaactcacacacagagcttgagactctccgg
ctagcgcagaaggtgaaggaagcactcgaagaaggagaagccggtgttgacaagctcaag
cagctctggcaagaagcacgcgccgccatccgcgcttcaagtgtcggctcgccaatcatg
tag
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