Phytophthora sojae: PHYSODRAFT_353568
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Entry
PHYSODRAFT_353568 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12890
serine/arginine-rich splicing factor 1
Organism
psoj
Phytophthora sojae
Pathway
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_353568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_353568
Spliceosome [BR:
psoj03041
]
Common components
Common spliceosomal components
SR proteins
PHYSODRAFT_353568
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_ACIN1
RRM_3
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
20649408
NCBI-ProteinID:
XP_009515917
JGI:
Physo3_353568
UniProt:
G4YPP5
LinkDB
All DBs
Position
Unknown
AA seq
173 aa
AA seq
DB search
MGTRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMD
GRDFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGRGGDRFDRGRNPPQRTDYRVRVTD
LPRDVDWRNVKDFLRTGGEVTYCNIEADGSAIAEFQTKDDMEDAIKKLDDTEF
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcgtgtgtacgtgggcggccttccgcgcgacgccacctcgcgcgagatccag
gacggcttcaaccgctacggccacgtgtccaacatctgggtggcgcgcaacccgcccggc
ttcgctttcgtggacttcgaagacccgcgtgacgctgacgacgccattcgctccatggac
ggccgcgacttcctgggcggacgcattcgtgttgagctcgctcgtggtggcagccgccgt
gacggtggcggccgtcgcggtgacgacgaccgtggtggctacggcggccgcggtggcgac
cgtttcgaccgtggtcgcaacccgccccagcgcactgactaccgtgtgcgtgtgactgac
ctgccgcgcgacgtggactggcgcaacgttaaggacttcctccgcacgggcggcgaggtc
acgtactgcaacatcgaggctgatggctcggccatcgctgagttccagaccaaggacgac
atggaggatgctatcaagaagctggacgacacggagttc
DBGET
integrated database retrieval system