KEGG   Phytophthora sojae: PHYSODRAFT_354295
Entry
PHYSODRAFT_354295 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
psoj  Phytophthora sojae
Pathway
psoj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PHYSODRAFT_354295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoj03021]
    PHYSODRAFT_354295
   03036 Chromosome and associated proteins [BR:psoj03036]
    PHYSODRAFT_354295
Transcription machinery [BR:psoj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PHYSODRAFT_354295
   Coactivators
    SAGA/TFTC/STAGA complex
     PHYSODRAFT_354295
Chromosome and associated proteins [BR:psoj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     PHYSODRAFT_354295
    STAGA complex
     PHYSODRAFT_354295
    TFTC complex
     PHYSODRAFT_354295
    SAGA complex
     PHYSODRAFT_354295
    SLIK complex
     PHYSODRAFT_354295
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Vps41 Cytochrom_D1 PROPPIN Ge1_WD40 Beta-prop_Nup120_160 WD_LRWD1 WDR54 PEP5_VPS11_N Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 20649580
NCBI-ProteinID: XP_009523167
JGI: Physo3_354295
UniProt: G4Z898
LinkDB
Position
Unknown
AA seq 652 aa
MSLLSFELLNTFLSQERLFLLLSIVNERVNLVVTSNQPGIQIQQLQDAVTPGDLGVLNNL
EPKDDAASGYKTSDELAQAVAASENPSESEIAMPLTTGAYDVDYMVRATGSNAVGSAGSG
GYTVHDLNAIPVTWGVLPERKVHDPSAEEGEGGAEAGKEGGTGTSNGVAGGNSAGGAGDA
SGAADGDKKSGADSSKAGDKGKAAASSADAQRKHKRVKLSSDGTAGKKKELLEETGPLPD
RKNAFNADVLEKLVLRVPANMKEHILEDIRVRAPVSRGALPSALCFTLLNSATHINNMCF
SDDVTMVGAACDDASFRVWRNDDQPLGTATGSAYHGNAGPSYTEAEEEEKMAVLRGHSSA
VYGASFSPDNRFALTASADSTVRLWSLAAKSNLVVYRSHQGAPVWDVTFAPLGYYFATCS
MDRTARLWSTDHMTPLRVFAGHLSDVDCVRFHPNHNYLATGSSDKTVRLWDVQSGKCVRV
FTGHFRGVQCLAFSRNGRYLASSGEDQYINIWDLQAGKRLETLMGHKAMVTSLDFSQEST
ILASGGMDSTVRLWDMKALTEQPSTYSALSGAMADLHVSSSDVSVANDSQLPGRSRFVKP
VPMVRPGAVQELPSSRFLLKTLRSKQTPMYRVHFTPRNLLLAGGIFHPKMET
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgagtttgctgtcgttcgagctgctcaatacatttctgagccaggagcggcttttcctg
ctgctctcgattgtcaacgagcgcgtaaacctcgtggtgacgtcgaaccagccaggcatt
cagatccagcagctacaggatgctgttacaccgggcgacttaggggtactaaacaatttg
gagccgaaggacgacgcagctagcggatacaagacgtcagatgaacttgcacaggctgtt
gctgcgtccgagaatcccagcgagagcgagattgccatgccgctgacgacgggcgcgtat
gatgtagactatatggtgcgtgctactggcagcaacgcggtgggctcagcaggtagcggt
ggctacactgtgcacgatctaaacgccatccctgtgacctggggtgttctacccgagcgt
aaagtgcatgatccatcagctgaggaaggagaaggtggcgctgaagcagggaaggaaggt
ggaactggtacttccaacggagtagcgggtggtaactccgctggaggggccggtgatgct
agtggagcagccgatggtgacaagaagtccggtgcggacagctcgaaagctggcgataaa
ggcaaggcagccgcatcctctgctgatgcgcagcgcaaacacaagcgtgtaaagttgtcg
agtgatggcaccgcaggcaagaagaaggagttgctggaagaaacgggtcctctaccggat
cgaaaaaatgcgttcaacgcggatgtattggagaaactcgtgctgcgcgtacccgcaaac
atgaaggagcacatcctggaggacattcgggttcgcgcaccagtcagccgaggcgcgctc
ccatcagccttgtgctttaccctgctcaattcagcaacacacatcaacaacatgtgcttc
agcgatgatgtgacgatggtaggcgccgcctgtgacgatgcctccttccgtgtttggcgc
aacgacgaccagcctcttggaacagccacggggtccgcgtatcatggcaacgcgggacca
tcatacacggaggccgaggaagaagagaagatggctgtgcttcgaggccactcgagcgct
gtgtatggtgctagtttttctcctgacaatcgattcgcactaacggcgtcagctgactcg
acagttcggctgtggagtctggcagcgaagagcaacctggtcgtgtatcgctcgcatcaa
ggcgcccccgtgtgggatgtaactttcgcgccgctcggatattactttgcgacttgctcc
atggaccggaccgcgcggctttggagtacggatcacatgacgccacttcgcgttttcgct
ggccatttgtcggatgtggactgcgttcgattccacccgaaccacaactacctggcgacg
ggctccagcgacaagactgttcggctgtgggacgtgcagtcgggcaagtgcgtccgtgtg
ttcacgggccacttccgtggcgtgcagtgccttgcgttctcgcgcaatggccgctacctc
gccagttcaggagaagaccagtacatcaacatttgggatctgcaggccggcaagcgtctg
gagaccctcatgggccacaaggccatggtcacgtcgttggacttcagccaggagagtact
atattagcaagtggtggcatggactcgacggtgcgtctctgggatatgaaggcgctcacc
gagcagccctcgacctactcggcgctgtctggtgcgatggccgacttgcacgtcagttcc
tctgacgtcagcgtggcaaatgactcgcagcttcctggccggagtcgcttcgtgaagcct
gtgcccatggtgcggccaggcgcagtgcaggagctgccgtcctcgcgcttcctgctcaag
acgctgcgctcgaagcagacgcccatgtaccgcgtgcacttcacgccgcgcaacctgctg
cttgctggcggcatcttccacccgaaaatggagacatag

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