Phytophthora sojae: PHYSODRAFT_354403
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Entry
PHYSODRAFT_354403 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
psoj
Phytophthora sojae
Pathway
psoj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHYSODRAFT_354403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_354403
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PHYSODRAFT_354403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
20649607
NCBI-ProteinID:
XP_009524323
JGI:
Physo3_354403
UniProt:
G4Z4R9
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MAEQEEVVEPLHLELEDREVYLAKIPTALGASWKNVQESELMLGSIKLEKKSVLGRRKGM
LTVNPSTLEDDIPTEYRIEISETPLKLKVFSLDGSGRMAIEGTVKNSCTVMAQRNDQYSK
MCKQRLIKSMVKTRIVQPLEDLPRVKKARIQFTIEKPDAENEEDDADSKLLDKSDKKIKM
SKDELKNLVFHHFEEREYWPLKELNYHCRQPESFLKEVLKEICVYHRKGPNKSCYELKPQ
YKDGVSSNA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaggaggaagtggtggagccgctgcacctcgagctggaggaccgcgaggtg
tacctggccaagatcccaacggctctcggcgcgtcgtggaagaatgtgcaagagagcgag
ctgatgctgggctccatcaagctggagaagaagagcgtgctgggtcgccgcaagggtatg
ctgacggtgaacccgagcacgctggaggacgacatcccgacggagtaccgcatcgagatc
agcgagaccccgctgaagctcaaggtcttctcgctggatggctcggggcgcatggcgatt
gagggcacggtgaagaacagctgcacggtcatggcccagcgcaacgaccagtacagcaag
atgtgcaagcagcgcctgatcaagtcgatggtcaagacgagaattgtgcagccgttggaa
gatcttcctcgcgtgaagaaggcgaggatccagtttactattgagaagcctgacgctgag
aacgaggaggacgatgctgactcgaagcttctggacaagtcagacaagaagatcaagatg
agcaaggacgagctcaagaaccttgtgttccaccacttcgaagagcgcgagtactggccg
ctcaaggagctcaattaccactgccgtcagcccgagtcgttcctgaaggaggtgctcaag
gagatttgcgtgtaccaccgcaagggacccaacaagagctgctacgagcttaagccccag
tacaaggatggcgtctcgtcgaacgcgtaa
DBGET
integrated database retrieval system