Phytophthora sojae: PHYSODRAFT_356172
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Entry
PHYSODRAFT_356172 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
psoj
Phytophthora sojae
Pathway
psoj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHYSODRAFT_356172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_356172
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PHYSODRAFT_356172
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
UTP15_C
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
DSE1_N
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_ACSF4
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_EIPR1
ASA1
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_At4g14310
Motif
Other DBs
NCBI-GeneID:
20649958
NCBI-ProteinID:
XP_009538606
JGI:
Physo3_356172
UniProt:
G5AEV5
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MATSGEFKRLVLKQFPATTEVETAENTYWKKFHAPQELQQVGPVTHIDVSPVAPHQVAIT
SSTRIHLYSTTTNEIVKTFSRFRDVVYSGTFRSDGKLLVAGGEAPYVQVLDINTRAILRS
FKGHSAAIRSTRFSADNVHVLSCSDDKTSRYWDLPTGKPLALLGEHSDYVRSSAANPSSH
NVWATGSYDHTVKLWDLRASDQTVSKSTMSLDHGAPVESCMIMPGGSLLLSAGGNSIKVW
DILSGGRLLHSFSSHQKTITSLGLDGSGTRLMSGSLDGHLKIYDLKTYELAHGFKYKSGV
LAFGMSPSNSHLFAGTVDGILAVRRRTVKRAEQTDAKNRQAIIRGGSYKYFLRGKNAQPA
PADYTVATTRHKRIQPYDRALRKFDYKKALNEALDTRSPVVVASMLEELRLRVGLKRALG
GRDEETLEPLLAFLIKYVTDPKYASLLIHVCTIVCDLYAPKLSQSMLIDSLFVKLREKLN
EELRVQKQVLGVVGMMDSVMAAQSNGTIGVDASS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagcggcgagttcaagcgcctggtgctcaagcagttcccggccacgaccgag
gtggagacggccgagaacacgtactggaagaagttccacgcgccgcaggagctgcagcag
gtcggacccgtcacgcatatcgacgtgtcgcccgtggcgccgcaccaagtggccatcacg
tcctccacgcgcatccacctctacagcacgacgaccaacgagatcgtcaagaccttcagc
cgcttccgcgacgtcgtgtactcgggcaccttccggtcggacggcaagctgctggtggcc
ggcggagaggcgccctacgtgcaggtgctggacatcaacacgcgtgcaattctgcggtcg
ttcaagggccactcggccgctatccgcagcacgcgcttctcggccgacaacgtgcacgtg
ctttcgtgttccgatgacaagacgtctcgctactgggacctgcccacgggcaagccgctt
gccctgctgggagagcacagtgactacgtgcgctcgtcggcggccaacccgtcgtcgcac
aatgtgtgggctacgggctcgtacgaccacactgtcaagctctgggacctgcgcgcgtcc
gaccagacggtgtccaagagcaccatgagcctggaccacggcgcccccgtggaatcgtgt
atgatcatgcccggtggcagtctgctgctctcggccggcggcaactcgatcaaggtgtgg
gacattctcagcggcggacgtctgctgcactcgttctcgagccaccagaagaccatcaca
agcctcggtctcgatggcagtggcacgcgtctcatgtcgggatcgctggacggccacctt
aagatttacgacttgaagacgtacgagctggcgcacggattcaagtacaagagcggcgtg
ctggccttcggcatgtccccgtcgaactcgcaccttttcgcaggcactgtggacggcatc
cttgctgttcgtcggcgtaccgtcaagagggcagagcagactgatgccaagaaccgtcag
gcgatcatccgtggtggcagctacaagtacttcctgcgtggcaagaacgcacagccggct
cctgcggactacaccgtggccaccacacgtcacaagcgtattcagccgtacgaccgcgcg
ctgcggaagtttgattacaagaaggcgctgaacgaggctttggacacacgctcgccggtt
gttgtcgctagtatgctggaggagctgcgtctgcgtgtcggactcaagcgtgccctggga
ggacgtgatgaggagacgcttgagccgctcctggctttcctcatcaaatacgtgacggac
cccaagtatgcctcgctcctcatccacgtgtgcaccattgtgtgcgacctgtacgcgccc
aagctgagtcagtccatgcttatcgacagcttgttcgtgaaattgcgtgagaagctgaac
gaggagctgcgtgtgcagaagcaggtgctgggcgtggtgggcatgatggactcggtcatg
gccgctcagtccaacggcaccatcggtgtggatgccagcagttag
DBGET
integrated database retrieval system