Phytophthora sojae: PHYSODRAFT_356229
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Entry
PHYSODRAFT_356229 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
psoj
Phytophthora sojae
Pathway
psoj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHYSODRAFT_356229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_356229
03012 Translation factors [BR:
psoj03012
]
PHYSODRAFT_356229
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PHYSODRAFT_356229
Translation factors [BR:
psoj03012
]
Eukaryotic type
Release factors
PHYSODRAFT_356229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
20649976
NCBI-ProteinID:
XP_009539693
JGI:
Physo3_356229
UniProt:
G5AI22
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MPVPKKGGAAVLGAKPTAAPAPPAPAAPAAPVAPAEPVAKLEEKVEKLAVEEKKVEEKKA
EEPKAEEEAEEDTFEEEAEVGDEDPREHLNVVLIGHVDAGKSTLSGNLLYLMDMVDKRTI
ERYEREAKQRNRDSWFLAYIMDTGEEERAKGKTVEVGRAHFETETRRFTILDAPGHKNYV
PNMIQGASQADVGILVISARKGEFETGFERGGQTREHAMLAKTLGINKLIVVINKMDECS
WGQERYDECVNKLRPFLRMCGFAVKRDVAFIPVSGLQGDNVKVRVDKSKAPWYEGESLID
HMDTMHIANRNPDGPTRVPILDRYADRGTIALGKVESGILKTGQKVLLMPTNATAIVNQV
YINELPVRTAKPGENVTIRLSCGLDEVQKGFVLCGTKEETPPRAIHAFAAQIALVDTLEH
RPLLTAGYKCILHIHTVAQECVVAKLLRPIDPKTGKPVKKHVTFIKQGQSVVCRIEVEQS
ITVETFANMPQLGRLTLRDEGKTIAIGKVLALEK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtccccaagaagggcggcgctgctgtgctgggagccaagcccactgctgccccc
gccccgcctgcccctgctgcgcctgccgcccctgttgcgcccgctgagccggtcgccaag
ctggaggagaaggtggagaagctggccgtggaggagaagaaggtcgaggagaagaaggcc
gaggagcccaaggccgaggaagaggctgaggaggacacgttcgaggaggaggccgaggtc
ggcgacgaggacccgcgcgagcacctgaacgtcgtgctcattggccacgtcgacgccggc
aagtcgacgctgtcgggtaacctgctgtacctgatggacatggtggacaagcgcacgatc
gagcgctacgagcgcgaggcgaagcagcgcaaccgcgacagttggttcctggcctacatc
atggacacgggcgaggaggagcgcgccaagggtaagacggtggaggtcggacgcgcccac
ttcgagacggagacccgccgtttcacgattctggacgcccccggtcacaagaactacgtg
cccaacatgatccagggcgcgtcgcaggccgacgtgggtatcctcgtgatttcggcccgt
aagggcgagttcgagactggtttcgagcgtggtggacagacccgtgagcacgctatgctg
gccaagactctgggcatcaacaagctcattgtggttatcaacaagatggacgagtgcagc
tggggccaggagcgttacgacgagtgcgtgaacaagctccgtccgttcctgcgcatgtgc
ggtttcgctgtcaagcgtgacgtggctttcatccccgtgtctggcctgcagggcgacaac
gtcaaggtgcgtgtggacaagtccaaggctccgtggtacgagggtgagtcgctgattgac
cacatggacaccatgcacatcgccaaccgtaacccggacggacctacgcgtgtgccgatc
ctggaccgttacgccgaccgcggcaccatcgctctgggcaaggtggagtctggtatcctg
aagactggccagaaagttcttctgatgcccacgaacgccacggccatcgtgaaccaggtg
tacattaacgagctgcccgtgcgcacagccaagcccggtgagaatgtgacgatccgtctc
tcctgcggccttgacgaagtccagaagggcttcgtgctctgcggcaccaaggaggagacc
cctcctcgtgccatccacgccttcgctgctcagatcgctctcgtggacaccctggagcac
cgcccgctgctgacggccggctacaagtgcatcctccacatccacaccgtggcccaggag
tgcgtcgtcgcgaagctgcttcgccccatcgacccgaagacgggcaagccggtgaagaag
cacgtgaccttcattaagcagggccagtcggtcgtgtgccggattgaggtggagcagagc
atcacggtcgagacgttcgccaacatgcctcagctgggccgtctgactcttcgtgacgag
ggtaagacgatcgctatcggtaaggtgctggcgcttgagaagtaa
DBGET
integrated database retrieval system
