Phytophthora sojae: PHYSODRAFT_360727
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Entry
PHYSODRAFT_360727 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14303
nuclear pore complex protein Nup160
Organism
psoj
Phytophthora sojae
Pathway
psoj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHYSODRAFT_360727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_360727
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_360727
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHYSODRAFT_360727
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PHYSODRAFT_360727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
CBP30
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
20650137
NCBI-ProteinID:
XP_009528042
JGI:
Physo3_360727
UniProt:
G4ZDQ5
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MRPLLQEAQFACFEDDEGVTSSDVTSLPSFVVSSPAVRSQPPKSFARVRALECSGSGSFY
FQNESLRDRFVCWRVLKNVVVLREWSLNTTLRQNGVRLEFPAPVVNTGVFAVESWEDDAV
TINVVTHAGTIHRFTYAVPSDNNLSIFSQADAKAFPEPKPATRTRCDVLQVLNSDEILSV
ALWVNEYNLVLGTDSGRVLGVNFGLPSDAKKMQEFVFSDESVVSWLWNGLIKTTAAKFKG
VAEDGERRDVGAAIVAITCFQIDAEDENEESGNGEKDVCVITVSADCVLRAWSFGSQSCL
GRQQLRSLVTPQLKDEEDSDEARWENEDLDGDDGVNTLGVYATHAKVVALSPTESDNCRL
LVHFDTTAAHSTEIFLLRGDVHPVAASSAGAGGEELALDTARVFTVQSVEQKSKRGLKMV
DFAVDKNFLFSSWRSLDGDEVYIHPNPMALTGPKRIQGQPVSSLDVQMQKYEEEDSEWLF
DLKEEGVMTLIDDFFAERILLPGRFSRQNLSNAIEEAQNGALGGFSSQSPFAHRLPKYKD
VLVRLVSSRCVDAAGAAAVRNGTAPSVLRIRIWKELIALCTKHWRCENVPIGFATTTNAL
LPGAPVMLRRNRVSLLFPSAPSITAAFVPQAEQGSSTAECVADLVSEVLPVFDAFPSQSF
QSFIHREVADVVSDWKVESFVALARHCVRLGLNPDFVASAPVTGQTISAELMLARSILRL
SKLLGGDAGFQDQVFHDLVELLFPFELSRGSGAYKSSSPSSDDDEEMTNASEDFTMADAT
APADYYSTTRRAFFAGHEMCFALDQVASRTIDEMCNQSLRVVLFLAYLVDTRPAFLSSAT
LSKIVQVYLPRSITVYQRWRLSRWVASQGITQPLADADPAITSSATLMPPLLQMFLLDVN
RKLNRSGSFKRALSVLQLASASNNVRSEEAHGVLATFTREILQFVSQPNDSLVRFLHKRQ
QFRLLRAMFCCNLSDVSLHGSRKGEAASSQHSEQVHQYVRSIGECLACEGQEAAARAHNE
EDARDHARWCFQQAIRCFSICLSNFFAERKPRSSRSEKALEQFIYDVVGLLKETVPRGFY
DQLLSFLWTVVTQALSHLAHHDGGERSFALQSFIWVNVFKYSVEERLFRDAHLALMHTAE
LSAALGGSESASDAEGTASECVNYLVKELYRYGHLDLICELQWGSLESHVEKYILWQAAN
ATVVHGDGLDAGAIRYYNLLFTFYMRKQQPANAASSLYALALRLHLAVSTSTAALEAQRN
ALNAACNALRALPVENRWVVRKLHTEELKRPALDASEGSKSAPSLSVVTLEDMRRELSVL
DGKLRLLALGHSESVLLSTMDSDEVIALLVDAVNSSCNNTGNTTLAERRRAGLLSIEIAA
DIAGRSSGASLTNLTKSLARYCVASEHPAVSSSISRSDSDLLWDLLENLLENATKLEQYE
VAAETVLDFWQQQGHKLTLPEWLYKRLASPTSGSPAKLLTLYLKHGLLLEALQLVEGLLP
DATAMLGGNAKSAFSFQSQKEPRVGPPELPWIPYNLIDALLDSTSAVLNQGTAGDVSTAA
ITRLRTQDHSLREQLTRYFRSANALQQAQEAAHLARSSIDLDL
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgctgctgcaggaggcgcagttcgcgtgcttcgaggacgacgagggggtgacg
agctcggatgtgacgtccctgccgagcttcgtggtgtctagcccggcggttcgctctcag
ccgcccaagagtttcgcgcgagtgcgcgcgttggagtgcagcgggtctggcagcttctac
ttccagaacgagagtttacgtgatcgcttcgtgtgctggcgcgtgctcaagaacgtggtg
gtgttgcgcgagtggagtttaaacactacgttgcggcaaaacggcgtgcggttagagttc
cccgcccccgtggttaacactggcgtgttcgccgtggagagctgggaggatgacgccgtc
actatcaacgtggtgactcacgcgggcaccatccaccgcttcacttacgccgtccccagt
gacaacaacctcagtatcttctcccaggctgatgcaaaagctttccccgagccgaaaccg
gcaactcgcacgcgttgcgacgtgttgcaagtgttaaacagcgacgagattttaagtgtt
gcgctgtgggtgaacgagtacaacctcgtgttaggtacggactcgggccgggtgcttggt
gtgaacttcggactgcccagtgacgccaagaagatgcaggagtttgtgtttagcgacgag
tcggtcgtgagctggctgtggaacggactgattaaaaccacggcggcaaagtttaagggt
gttgccgaggacggcgagaggagggacgtgggggcggcaattgttgccataacgtgtttc
caaattgacgcggaggacgaaaacgaagagagtggaaatggcgagaaggatgtttgcgtc
atcacggtctccgccgactgcgtgttgcgcgcctggagcttcggctcgcagtcgtgtctg
ggacggcaacagttgcggtctctggttacgccacagcttaaagacgaggaggacagtgac
gaggctaggtgggaaaacgaggacttggacggagacgatggtgttaataccttgggagtg
tacgccacccacgccaaggttgttgcattatcgcctacggaatcggataattgccggcta
ctggtgcattttgacacaacggcggcccactccacggagattttcctgcttagaggagac
gtgcaccctgttgcggcttcgagtgccggagcgggaggcgaggaacttgcgctggatacg
gccagggtgttcaccgtgcagtccgtcgagcaaaaatccaagaggggattgaagatggtg
gattttgccgtggataaaaacttcctcttctcgtcgtggcggtcgctggacggagacgaa
gtgtacatccacccgaacccgatggctctcaccggtcccaagcggatccagggccagccg
gtgagcagtctggacgtgcagatgcaaaagtacgaggaggaagacagcgagtggctcttc
gacctgaaggaggagggcgtgatgaccttgatcgacgactttttcgccgagcggatcttg
ttgccgggtagattttcgcggcagaatctgtccaatgctatcgaggaagcgcagaacgga
gcgctgggcggattttcctcgcagtctccgttcgcgcaccggttgcccaagtacaaggac
gtcctggtgcgtctcgtgtccagtcggtgcgtggatgctgctggagctgctgcagtccgc
aatggcaccgcccccagtgtgttgcggatccgcatctggaaggagctcatcgctctgtgc
accaagcactggcggtgcgagaatgtgccgattggtttcgctactacaacgaacgcgctg
ctgcctggcgcgcctgtgatgctgcgtcgtaaccgcgtgtcgttgctgttcccctcggct
ccgtcgattactgcggccttcgtgccccaagcggagcagggctccagcactgccgagtgc
gtggcggacctggtgtcggaggtcctcccggtgttcgacgcgttcccaagccagagtttt
cagtcgttcatccaccgcgaggtagcggacgtggtctcggactggaaggtcgagtccttt
gtggcgttggcccgtcactgcgttcgtcttggcctgaacccggacttcgtcgctagtgct
ccagtcactggccaaacgatcagcgctgagctgatgctcgcgcgctccatcctccgcctc
agtaaactgctgggcggcgacgctggcttccaggaccaagtgttccacgacctggtggag
ctcctgttcccgtttgagctgtcacgtggttcgggcgcgtacaagtcctcgtccccctcc
agcgatgacgacgaggagatgaccaacgcctcggaggatttcacgatggcggacgccacg
gcccctgccgactactactcgaccactcgtcgtgccttcttcgctggccacgaaatgtgc
ttcgcgctcgaccaggtggcctcgcgtacgatcgatgaaatgtgcaaccagtcgctgcgc
gtggtgctcttcctcgcgtatctggtggacacgcgccctgcgttcctgagctcggccacg
ctgagcaaaatcgtgcaagtgtacttgcccaggtctatcactgtgtaccagcgttggcgg
ctcagccgatgggttgccagccaaggcatcacgcagcccctcgcagacgcagacccggcc
attacgtcgtcggccacgttgatgccgccgctgctgcagatgttcctcctggacgtcaac
aggaagctgaaccgttcgggaagtttcaagcgtgcgctgtcggtgctgcagctcgcaagc
gccagcaacaacgtccgcagtgaggaagcgcacggcgtgctggccacgttcacgcgcgag
atcttgcagttcgtctcccagcccaacgactcgctcgtgcgattcctgcacaagcgccag
cagttccgactcctgcgcgccatgttctgctgcaacctcagtgacgtcagtctgcacggc
tccaggaagggcgaggccgcgagctcgcagcacagcgagcaggttcatcagtacgtgcgc
tccattggcgagtgtctggcttgcgagggtcaggaggctgctgcgcgtgctcacaatgag
gaggacgcccgcgatcacgcgcgctggtgcttccaacaggccatccgctgcttcagcatc
tgcctgtcgaacttcttcgctgaacggaagccgcgctcctcgcggtcggagaaggccctt
gagcagttcatctacgacgttgtgggcttgttgaaggagacggtgcctcgaggattctac
gaccaactgctgagcttcctgtggacagtggtcacgcaggcgctgagccacttggcccac
cacgatggcggcgagcggagctttgcactgcagtcgtttatttgggtgaatgtgttcaag
tattccgtcgaggagcgactcttccgcgacgcgcatctcgcgctcatgcacacggcggag
ttgtcggcagctctgggtgggtcggagtctgcctcggacgctgaaggaacggcgagcgag
tgcgtcaactacctggtgaaggagctgtaccgttacggccacctcgacctcatctgcgag
ctgcagtgggggtctctcgagtctcacgtggagaagtacatcctctggcaggcggccaat
gccaccgtcgtccacggtgacggtctcgatgcgggcgcgatccgctactacaacttgctg
ttcaccttctacatgcgcaagcagcagccggccaacgctgcgtcttcgctctacgcgctt
gcactgcggctgcacctggcggtgtcgacgtccacggcggctctggaggctcagcgcaac
gctctgaacgcggcttgtaacgcgctgcgagctctcccagtcgagaaccgctgggttgta
cgcaagctgcacacggaggagctcaagcggccggctctggatgcatctgaaggcagcaag
tcggcgccttctctgagtgtggtgacgctggaggatatgcgtcgtgagttgtcggtgctg
gacggcaagcttcggctgctggcgcttggccactcggagagcgtgctactgagcacgatg
gacagcgacgaggtgatcgcgctgctggtggacgccgtgaacagcagctgcaacaacact
gggaacacgacgctggccgagcgacggagagcggggctgctttccatcgaaatcgctgct
gacattgccggcagaagctctggcgcaagtttgacgaacctgacgaagtctctcgcgcgc
tactgcgtggccagcgagcacccggccgtgtcgtcctccatctcgcgctctgacagcgac
ctgttgtgggacctgctcgagaacttgctggagaacgcgaccaagctcgagcagtacgag
gtggcggccgagaccgtgttggacttctggcagcagcagggccacaagctcacactgccc
gagtggctgtacaagcggctggcaagccccacgtcgggaagcccggccaagctcctgact
ctgtacttgaagcacggactgctgctcgaggcgctgcagctggtggagggtcttctaccg
gacgctaccgctatgctcgggggaaacgccaagtccgccttcagcttccagtctcagaag
gagccgagagttggtccgcccgagctcccgtggatcccttacaacctcatcgacgcactg
ctggactcgacctcggccgtgctgaaccaggggacggctggtgacgtctccactgctgcg
atcactcggctgcgcactcaggaccacagtctccgcgagcagttgacgcgctacttccgc
tcggcgaacgcattgcagcaagcgcaagaagcggcgcatctcgcacgaagcagcatcgat
ctagacttgtag
DBGET
integrated database retrieval system
