Phytophthora sojae: PHYSODRAFT_361188
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Entry
PHYSODRAFT_361188 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_361188
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_361188
Spliceosome [BR:
psoj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PHYSODRAFT_361188
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
90S particles
RNase
PHYSODRAFT_361188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
20650160
NCBI-ProteinID:
XP_009530648
JGI:
Physo3_361188
UniProt:
G4ZTU5
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MVRVAVVGCAHGLLDDIYATINFVNEMDPEHPVELLLCCGDFECMRNMRDLDTLACPPKY
RALHAFHRYYKQEKTAPVLTVFVGGNHEASGYLQELHYGGWVAPNMFYLGAAGVINVAGL
RIAGLSGIYKQQHYTAGRFESMPFDNNTMRSVYHVRELEVFQLSHVQQVDKTPLGAFLSH
DWPRGIEQHGNVPQLLRRKPFFEQEIRTNTLGSPAGEFLLYQLRPQHWFAAHLHVKFAAI
VVHPEQTTDAVHASTNGDSAELAKADDKEEQEAAPKPPSQPATTKFLALDKCLPRREFMQ
ILDLATSATIVEASSAEEQKNEAVIAPATNGDKQDDTQEEKPDDTSRSPSSRPPPKIMFD
LEWLAILRATHHLASSNKFAPRVPQEEMKIEDKDIAWVKQRLQEFIAEKKLDKAEGEWIT
DFVKTAPGHGEEEGPVLVTGNPQTDLLLELLKLPHVATAPFVSGGTTAAAVEDPNEIDLD
EDDDDEENDDDVKPMETDAATPSDSTNVSSAAVATEAESAAPADPCEIDLDL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcgtcgcggtggtgggctgcgcccacgggctgctggacgacatctacgcgacc
atcaacttcgtcaacgagatggacccggagcaccccgtggagctgctgctgtgctgcggc
gacttcgagtgcatgcgcaacatgcgcgacctggacacgctggcgtgtccgcccaagtac
cgcgcgctgcacgccttccaccgctactacaagcaggagaagacggcgcccgtgctcacc
gtgttcgtcggcggcaaccacgaagcctcgggctacctgcaggagctgcactacggaggt
tgggtggcccccaacatgttctacctgggcgcagcgggcgtcatcaacgtggcggggctg
cgcatcgctggactctcgggcatctacaagcagcagcactacacggccggacgcttcgag
tcgatgcctttcgacaacaacaccatgcgaagcgtgtaccacgtgcgcgagctcgaggtc
ttccagctctctcacgtgcagcaggtggacaagactcctctgggggcgttcctgtcgcac
gactggccgcgcggaatcgagcagcacggcaacgtgccccagttgctgcggcgcaagcca
ttcttcgagcaggagatcaggaccaacacgctgggcagtcctgcgggcgagtttctactg
taccagttgcgtccgcagcactggttcgccgcgcacctgcacgtgaagtttgccgccatc
gttgtgcacccggagcaaacaaccgacgcagtccatgcatcaaccaatggtgacagtgct
gagctagcgaaggcggacgataaggaagagcaagaggcagcaccaaagcctccgtcgcag
ccggcaacgaccaaatttctggccctcgacaagtgcctcccgcgccgcgagttcatgcaa
atcttggacttagccacttccgccactatcgtagaagcttcgtcggccgaagaacagaag
aacgaagcagtgattgcaccggcgacgaacggagacaagcaagacgatacccaggaagag
aagccagatgacacaagccggagcccgagctcgagaccgccgcctaagatcatgttcgac
ctggaatggctcgcaattctgcgcgccacgcaccacctggcctcgtccaacaagtttgcg
ccgcgcgtgccccaggaagagatgaaaatcgaggacaaggatattgcgtgggtgaagcag
cgcctgcaggagtttatcgcggagaagaagctcgacaaggccgaaggtgagtggatcacc
gactttgtcaagacagcaccaggtcacggcgaagaggaaggacccgtcctcgtgaccggt
aatcctcaaacagatcttctgctggagctgctcaagctcccgcacgtcgcgactgcgccg
ttcgtcagcggtggcacgactgcggcggcggtcgaggaccccaacgaaattgacctggac
gaagacgacgacgacgaagagaacgatgacgatgtgaaaccaatggagaccgacgccgcc
acccccagcgatagcactaatgtcagctcggcggcagtagcaacagaagccgagtcggcg
gcacccgcagacccgtgcgaaatcgacctcgacctgtaa
DBGET
integrated database retrieval system
