Phytophthora sojae: PHYSODRAFT_361940
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Entry
PHYSODRAFT_361940 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psoj
Phytophthora sojae
Pathway
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_361940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_361940
Spliceosome [BR:
psoj03041
]
Common components
Common spliceosomal components
SR proteins
PHYSODRAFT_361940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
20650212
NCBI-ProteinID:
XP_009535149
JGI:
Physo3_361940
UniProt:
G5A428
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MEEGPMASTKLYVEEGPMASTKLYVGNLFYELTQRDVEAEFGKFGPIEQCAVKKGYAFVH
YEQLEDAELAVQEMNDKELGGRRLRVAFAVSHGTQRRYDGPPPPLQAPAGQPQQQQPPLL
HSPRFPVNASPNLFVANIPPHIKMSELDQAFAQFGEVKNVKVLPQARPDAPMSAFVDFSD
VASAQKAHSATIIVAGQHLRTDYNFRKNKGDGPRRMNRGSFDGNGYEDEERGGGSRARYD
SFDSQSGRRDHVSSRYEDEFEDAGHRRHHHHRSSRPHSSRHSREDPEERGRSGSPPRYRR
HCSSSSLRRGEEATGMRERSRDYGGERAYGRPDEVNEFQPRSQQSGYYESRSRGEPREYS
GRGMDKSPQEYRRYSRPEMSSSRHGSRRGPRNDRSWYEFVSSAPSVWAS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcccgatggcatcgaccaagctctacgtggaggagggcccgatggcatcg
accaagctctacgtgggcaacctcttctacgagctcacgcagcgcgacgtcgaggccgag
ttcggcaagttcggacccatcgagcagtgcgccgtcaagaaaggctacgcgttcgtgcac
tacgagcagctggaggacgcggagctggcggtgcaggagatgaacgacaaggagctgggc
ggccgccgcctgcgcgtggcattcgccgtgtcgcacggcacgcagcgccgctacgacggc
ccgccgccgcccctgcaggcccccgccggccagccccagcagcagcagccgccgctgctg
cacagcccgcgcttccccgtgaacgcgtcgcccaacctgttcgtggccaacatcccgccg
cacatcaagatgagcgagctggaccaggccttcgcccagttcggagaggtcaagaacgtc
aaggtgctgccccaggcgcggcccgacgcgcccatgtccgccttcgtggacttctcggac
gtggcctcggcccagaaggcccacagcgccacgattatcgtggcgggccagcacctgcgc
accgactacaacttccgcaagaacaagggtgacggaccgcgtcgcatgaaccgcggcagc
ttcgacggcaatggatacgaggacgaggagcgtggcgggggcagtcgcgcgcgctacgac
tcgttcgactcgcagtccgggcggagggaccacgtgtccagcagatatgaagacgagttc
gaggacgcgggccaccggcgccaccaccaccaccgctcgagtcgtccccactcgtctcgg
cacagccgcgaggacccggaggagcgcggacggagcggctccccgccgcgttaccgtcgt
cactgtagcagcagcagcctgcggagaggcgaggaagccaccggcatgcgcgagcgctcg
cgggactacggcggtgagcgcgcgtacggccgcccggatgaggtgaacgagttccagccg
cgttcgcagcagtctggatactacgagtcgcgctcgcggggcgagccgcgcgagtactcg
ggccgggggatggacaagtccccgcaggagtaccgtcgctacagtcgtcctgagatgtcg
tcgtcgcgccacggatcgcgtcggggcccgcgcaacgaccgcagctggtacgaatttgtc
tcctcagccccctcagtctgggcctcgtag
DBGET
integrated database retrieval system