Phytophthora sojae: PHYSODRAFT_411112
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Entry
PHYSODRAFT_411112 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
psoj
Phytophthora sojae
Pathway
psoj00040
Pentose and glucuronate interconversions
psoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PHYSODRAFT_411112
Enzymes [BR:
psoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PHYSODRAFT_411112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
SR1P
Motif
Other DBs
NCBI-GeneID:
20651690
NCBI-ProteinID:
XP_009521998
JGI:
Physo3_411112
UniProt:
G4Z2U8
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
FFAATAALIATASAASLPDGTWPASKGLVQFSEVRTIKAGEVFDGKMQTFERSNVKCDGQ
SESSWRTGVFFVEAGGHLKNVIIGKNQMEGVHCDQQDCIIENVWWDDVCEDALSIKGGSA
SSVTKVIGGGARYADDKVIQQNGLGKVIIDGFYGEDVSKLYRSCGTCGPKAREVSVSNTY
VVNPGNAVVTVNKNWGDKATLSNVWVKSSKATVKVCQWSQGNAKGEPSILGHGPSGTLCQ
YSTSDVHIN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttcttcgctgcgactgctgctctcattgcgaccgcctccgctgcttccctgccggacggt
acgtggcctgccagcaagggcctcgtgcagttctcggaggtgcgcaccatcaaggcgggt
gaggtgtttgacggcaagatgcagacgttcgagcgctccaacgtcaagtgcgacggccag
tccgagagcagctggaggacgggcgtcttcttcgtggaggccggcggtcacctcaagaac
gtcatcatcggcaagaaccaaatggagggcgtccactgcgaccagcaagactgcatcatc
gagaacgtgtggtgggacgacgtgtgcgaggacgcgctcagcatcaagggcggctcggcc
tcgagcgtgacgaaggtcatcggtggtggcgctcggtacgccgacgacaaggtcatccag
caaaacggcctgggcaaggtcatcatcgacggcttctacggcgaggacgtcagcaagctc
taccgttcgtgcggcacttgcggccccaaggcgcgcgaggtgtccgtgtccaacacgtac
gtcgtgaacccgggcaacgccgtggtgacggtcaacaagaactggggcgacaaggccacg
ctcagcaacgtctgggtcaagtcgagcaaggccactgtcaaggtgtgccagtggtcgcag
ggcaacgccaagggcgagcctagcatcctcggccacggtccttccggcacgctgtgccag
tactcgaccagcgacgtccacatcaac
DBGET
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