Phytophthora sojae: PHYSODRAFT_467880
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Entry
PHYSODRAFT_467880 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14569
ribosome biogenesis protein BMS1
Organism
psoj
Phytophthora sojae
Pathway
psoj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHYSODRAFT_467880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_467880
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
90S particles
GTPase
PHYSODRAFT_467880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
AAA_22
GTP_EFTU
AAA_16
AAA
MMR_HSR1
nSTAND3
PduV-EutP
Viral_helicase1
ABC_tran
AAA_18
AAA_33
AAA_19
AAA_28
AAA_5
RNA_helicase
AAA_17
NTPase_1
nSTAND_NTPase5
AAA_11
Motif
Other DBs
NCBI-GeneID:
20653612
NCBI-ProteinID:
XP_009516937
JGI:
Physo3_467880
UniProt:
G4YHT5
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MDALAGAAAGKGHRKSKAGAKVNKQKRKAYEKQKKEQPSLAEQRKNPKAFGVAKAGRARK
TIQRNLDRAHRKEYVPQQSRAEELPPPISVVVMGPPGSGKSTVIRSLVKRYTRHNLVEVK
GPVTVVSGKDRRITFFECPNDLNAMLDLAKIADLVLLLVDASFGFEMETFEFLNVLQVVG
FPKVMGILTHLDSFKKNKSLRKTKKRLKARFWTEIYQGAKLFYFSGISANKYPKGEIHNL
SLYISRMKFRPLTWRNSHPYMLADRFEDVTAPDDIQRNPLVDRRVTLYGYLRGTHLKPGM
KMHIAGAGDFYMDSVTAMPDPCNVPSSKKAADGTVKKKHLTQKDTLLYAPMSDVGNIMYD
KDAMYINLSQLNYTNPDTGDVVPDGEDADGVDTSGKSGMRIGLGGEGVEMVQSMQKMDVG
LDERLKGASLSLFKNTAAIRADEVDSDEEEEDSDDEDGDDEDVDSDEDEDGKPNVGKPKE
AIVRDSTGRMRRRAVFEESEETPETTKTGAESDSNDDDDSEDDSEEEEEVVTEEQSQLRW
KENMVSRAAANFLEREQADVNLMELVYGERQKLHMTERDLENEEEAKSDKRALKDDSDDD
DDFFKLKRKSNATGESSSASEKYNTINAMDCSRLHLGSDDTSDWTMPDVLEGIRNRFVTG
SWKRVNKKSRGGDDDEEEEEDVDDDNADPMNDDDMDGSFEDLETGEVHKGAADADSDDDS
NDGSDDEEEEQEETDEQIRERLRAQKSAKKSVEDDDDVEVGGQRKSKDDEDEEMTEVMVE
AKRLREEQAKRNAEEFGEEGEDMRLQLEGFRNGLYVRIEFSGVPAEFVRYYNPKNPIVVG
GLPNMEDTLGLVRMRFKKHRWHKKILKTNDPLVFSIGWRRFQSLPLYSIEDTNERHRYLK
YTPEHMHCHATIFGPMCPPNTGVVAFQTLSNNAEGFRVSGTGVVLELDHKFNVVKKLKLI
GTPSKIHKNTAFIKGMFNTELEVAKFEGASVRTVSGVRGRIKKALRGEKGDFRATFEDKI
LKSDLVFCRTWVPVEPKQLYNPVTSLLTNVKSSSKKSAMRLMKTTYELRKEQKLAVPVNP
DSLYKPIVRKERTFSALKVPKKLQANLPFASKPKEDKKKGGKGYLASRAVVLEPEEKKKY
GFMLRVNTVRRDREATRKERQSQRNAENLKRKQREEKQFEGVHKAEKKAKYRAEGKEAAY
RAQKAARG
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctcgccggagccgcggccggcaagggccaccgcaagtccaaggccggcgcc
aaggtgaacaagcagaagcgcaaggcctatgaaaagcagaagaaggagcagccgtcgctg
gccgagcagcgcaagaaccccaaggccttcggcgtggccaaggccgggcgcgcgcgcaag
accatccagcgcaacctggaccgcgcgcaccgcaaggagtacgtgccccagcagagccgc
gccgaggagctgccgccgcccatctcggtggtcgtcatgggccccccgggcagcggcaag
agcacggtcatccgctcgctcgtcaagcgctacacgcgccacaacctggtggaggtcaag
ggccccgtgacggtcgtgagcggcaaggaccgccgcatcaccttcttcgagtgccccaac
gacctcaacgccatgctggacctggccaagatcgccgacctcgtgctgctgctcgtggac
gcgagcttcggcttcgagatggagacgttcgagttcctcaacgtcctgcaggtcgtgggc
ttccccaaggtcatgggcatcctgacgcacctggacagcttcaagaagaacaagagcctg
cgcaagaccaagaagcgcctcaaggcgcgcttctggaccgagatctaccagggcgccaag
ctcttctacttctccggcatctcggccaacaagtaccctaagggcgagatccacaacctg
tcgctgtacatttccaggatgaagttccgaccgctcacgtggcggaactcgcacccgtac
atgctcgcggaccgcttcgaggacgtcacggcgcccgacgacatccagcgcaacccgctc
gtggaccgacgcgtgacgctgtatggatacctgcgcggcacgcacctgaagccgggcatg
aagatgcacattgccggcgctggagacttctacatggacagcgtcactgcgatgcccgat
ccgtgcaacgtcccgtcgagcaagaaggctgcggacggcacggtcaagaagaaacacttg
acccagaaggacacgctgctctacgcaccgatgtcggacgtgggcaacatcatgtacgat
aaggacgccatgtacattaacctgagccagctgaactacacgaacccggacacgggcgat
gtcgtgccggatggcgaggacgcggatggagttgacactagcggcaagagcggcatgcgc
atcggtcttggcggcgaaggcgtggagatggtgcagagcatgcagaagatggatgtcggt
cttgatgagaggttgaagggtgccagcctttcgctgttcaagaacaccgctgctatccgt
gccgacgaagtcgacagtgatgaggaggaagaggacagcgacgacgaggatggcgatgac
gaggatgttgacagcgacgaggatgaagatggcaagccgaacgtcggtaagccgaaggag
gccattgttcgtgacagcaccggccgaatgcgtcgtcgcgctgtgttcgaagaaagtgag
gagactcctgagaccaccaagactggcgccgagtcggactccaacgatgatgacgacagt
gaggacgacagcgaagaggaggaggaggtggtcaccgaggagcagtcgcagttgcggtgg
aaggagaacatggtgtcccgcgctgctgccaacttcctggagcgcgaacaggccgacgtg
aaccttatggagctcgtgtacggcgagcgtcagaagctccacatgacggagcgcgacctt
gagaacgaagaggaggctaagagcgataagcgtgctctgaaggatgacagcgacgacgat
gacgactttttcaaattgaagcgcaagtcgaacgcaactggagaatcttcgtcagcttcc
gagaagtacaacactatcaacgctatggactgctctcgcttgcacctgggcagtgatgat
acgagcgactggacgatgccggatgtgcttgagggtattcgcaaccgttttgtgactggc
tcgtggaagcgcgttaacaagaagagccgcggcggcgacgacgacgaggaggaggaggag
gatgttgacgatgacaatgcggaccccatgaacgatgatgatatggacggctccttcgaa
gacttggagacgggcgaggtccacaagggcgctgctgatgctgacagtgatgacgacagc
aacgatggtagtgatgacgaagaagaggagcaggaggagacggatgagcagatccgtgag
cgtctccgtgcgcagaaatccgcaaagaaatcagtcgaggacgacgacgatgtcgaagtt
ggaggtcagaggaagagcaaggacgatgaggacgaagagatgacggaggttatggtggag
gctaagcgcctccgcgaggaacaggccaagcgcaacgctgaggagttcggtgaggaaggt
gaggatatgcgtctccagctggaaggtttccgcaacggtctctacgtccgcattgaattc
tcgggtgtccctgctgagttcgttcgctactacaatccgaagaacccgatcgttgtgggc
ggtcttcctaacatggaggacactctgggtctggttcgtatgcgtttcaagaagcaccgt
tggcacaagaagatcctcaagaccaacgacccgctggtgttctccatcggttggcgccga
ttccagagtcttcctctgtactctatcgaggacacgaacgagcgtcaccgatacttaaag
tacacgccggagcacatgcattgtcacgctaccatcttcggcccaatgtgcccgcctaac
acaggtgtggtggccttccagacgctttctaacaatgccgaaggcttccgtgtgagcggc
accggcgttgtgctggagcttgaccacaagttcaacgtggtgaagaagcttaagttaatt
ggtacgcccagcaagatccacaagaacacggccttcatcaagggcatgttcaacacggag
ctggaagttgccaagtttgagggtgccagtgtccgcaccgtcagtggcgtgcgcggtcgc
atcaagaaggcgcttcgtggtgagaagggcgacttccgtgccacgtttgaggacaaaatc
ctcaagagtgacctggtcttctgccgcacgtgggtgcctgtggagcccaagcagctgtac
aaccccgtaacgtctctgctcacgaacgtgaagagctcgtcgaagaagagcgcaatgaga
ctcatgaagacgacgtacgagctgcgcaaggagcagaagctggcggtgcccgtgaacccg
gactcgctgtacaagccgatcgtgcgcaaagagcgcacgttctcggcgctcaaggtgccc
aagaagctgcaggccaacctgccgttcgccagcaagcccaaggaggacaagaagaagggc
ggcaagggctacctggccagtcgcgcggtggtgctcgagcctgaggagaagaagaagtac
ggcttcatgctgcgtgtcaacaccgtgcgtcgtgaccgcgaggcgactcgcaaggagcgc
cagagccagcgcaacgccgagaacctcaagcgcaagcagcgtgaggaaaagcagttcgag
ggcgtgcacaaggcggagaagaaggccaagtaccgggccgagggcaaggaagcggcctac
cgcgcccagaaggcagcgagggggtaa
DBGET
integrated database retrieval system
