Phytophthora sojae: PHYSODRAFT_469399
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Entry
PHYSODRAFT_469399 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHYSODRAFT_469399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_469399
03016 Transfer RNA biogenesis [BR:
psoj03016
]
PHYSODRAFT_469399
03029 Mitochondrial biogenesis [BR:
psoj03029
]
PHYSODRAFT_469399
Enzymes [BR:
psoj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
PHYSODRAFT_469399
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
PHYSODRAFT_469399
Transfer RNA biogenesis [BR:
psoj03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
PHYSODRAFT_469399
Mitochondrial biogenesis [BR:
psoj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
PHYSODRAFT_469399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
20653811
NCBI-ProteinID:
XP_009515276
JGI:
Physo3_469399
UniProt:
G4YF97
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MVSGGKAPRRGAAQRRARLQGANALLQSGPDSAYPSSRLLVWHSRFSHEASRHDSVVSGH
ALNQQMEVYLPGKAGKAAAQSLQWETGFYYEVKASVDMFLSPAFIREYLADGGAVFMVAK
NAAVDASQSAMLLPSDQLLLLVDTHTYQQLGIVGEKYGKAVPATCRSTRGQKYVITLDLT
SSTFAEEGDNAFRDRVRRALSSKLEDLEMLMCAYSQRGAARTILFGDDDTVPRQRIELNA
QMTTLSEVFLPKFDAFYAQLGGKEERNEDDGNKLRTSLQEAYDWLGLVACRLTDLLQRQK
LEEYVSTFTGFPDSFECEPDSEVTTVRWRGLLAAPFCSTIVEKVQRAVKNGEVPWGAVTV
WGFPDVFLQRREHGYLGNGSNNYTLLILPNDEYFLLQALGPHDATV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtggtggcaaggctcctcgacgcggcgcggcgcagcggcgcgcgcgactgcag
ggggcaaacgcactgctgcagagcggcccggacagtgcgtacccgtcctcgcgcctgctg
gtgtggcactcgcgcttctcgcacgaagcttctcgccatgacagcgtcgtctcgggtcac
gccttgaaccagcagatggaggtgtatctgcctggcaaggccgggaaggccgcagcgcag
tcgctacaatgggagacgggcttttactacgaggtcaaggcctcggtcgacatgtttctg
tcgccggccttcatccgcgagtacctggcggacggcggcgccgtgttcatggtggccaag
aacgcggcggtggacgcgtcgcagtcggcgatgttgctgccgtcggaccaactactgcta
ctggtggacacgcacacgtaccagcagttgggtattgtgggtgagaagtacggcaaggcg
gtgccagccacctgcaggtcgacgcgcggacagaagtacgtcattacgctggacttgacg
tcgtcgacgttcgcagaggaaggagacaacgcctttagagatcgagtgagacgggcgttg
agctcgaaactggaggatctggagatgctcatgtgcgcgtacagtcagcgcggagcggcg
aggactatattgttcggggacgatgacacggtgccgcgtcagcgcattgagctgaacgcg
cagatgacgacgctcagcgaggtgtttctgcccaagtttgacgcgttttacgcgcagctt
ggtgggaaggaggagcgtaatgaggacgatggaaataaactgaggacgtcgctgcaggag
gcctacgactggctgggtctggtggcatgccgactcaccgacctcttgcaaagacagaaa
ctggaggagtacgtgtcgactttcacgggcttccccgactcgttcgagtgcgaaccggac
agtgaagtgaccacggtgcgatggcgtggcctgctggctgctccgttttgctccactatt
gtggaaaaggtgcagcgtgctgtcaagaacggtgaagtgccgtggggtgcagtcacggtt
tggggcttcccggatgtctttctgcaacgacgagagcatggttacctagggaacggcagc
aacaactataccctgctcattctgccaaacgatgagtacttcctgctgcaggctctcggg
ccgcacgacgccacggtgtaa
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