Phytophthora sojae: PHYSODRAFT_471728
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Entry
PHYSODRAFT_471728 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_471728
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
PHYSODRAFT_471728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
EST1_DNA_bind
PRORP
TPR_16
TPR_14
TPR_1
TPR_2
TPR_17
Motif
Other DBs
NCBI-GeneID:
20654135
NCBI-ProteinID:
XP_009514531
JGI:
Physo3_471728
UniProt:
G4YEH9
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
QSISERLWRSWYREIEKNQSPFVLTSCSKFYSSLVDQLQASLRRPNRLPEHLDGLKHSLQ
LALVALGDVARYQQNRLQKGESRDWSAARAYYQRALEVAPSSGKVYNQMGLLAVLEGKLV
DGAYLYARSLVCESPFGNSSNLLHVLQRGRTADKQLQAQQQVSGSPSCEAMEAYSARVLS
CLRMLLTGKDSKSDWGEALKRSLAALGHLLDVCDQQDESMPIDGSLLEKLSSLLTHAVCL
TIVLTHSTQHVIEEKLSRESFDEAFKAGAGSERTQKALEAGNVMVSCVLLKLVALLSASA
ESTRTKYFANALLPAVNVYLDWLQLHQKLLLKLNPGAAALQEHCIALFHTLSANGFIERG
LCCARKWDDDLSSAVLPEDREMNGFLPYEKALLARFPEELTPEKNSSRQLTEEERLVLRA
TRFMTLSERFVFSGKPPTPISCMESGSSKITQLASSGAIATTIVDPFAIDPVLNGRLCVL
CSNTSTFAEGVCEFCGYEDEDCDVDTVSDDGGDSLNHPSWIQQYDLAYNNNNSSPGTSPA
SPQSPPVRRGSSTSSSSPQSTPPMSPPGKLEIDFKTIMAIGADNDDFQDGLTASKDQRRL
IVVDAPNVAMRHGKGKVFSCAGIELAVNYFQALGHRVVAFIPDYMLQSDDERAEREEQGE
VLTAAKIPDDVALLERLVHKGVLIPTPPQDYDDSYSIQYAGLHDGYVVTNDLFRDHIVNM
VGPRERKVAMRAWLRAHQISYSWVRNEFLPNPNFRCEVACT
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
cagagcatcagtgagcggctgtggcggagctggtaccgagagatcgagaagaaccagtcg
ccgttcgtgctgacgtcctgctccaagttctactcgagtctcgtcgaccagctgcaggcc
tcgctgcgccgaccgaaccgcctgccggagcatttggacggactgaagcactcgttgcaa
ttggcgctagtggcgctgggtgatgtcgctcggtaccaacagaaccgacttcagaaaggt
gagagtcgggattggtctgcggcgagggcatactaccagcgcgcgctggaagtggccccg
tcgagcggcaaagtgtacaaccaaatgggcctgctggcagttcttgaggggaagctggtc
gatggagcttacctgtacgcgcgcagcctcgtgtgtgagagccccttcggtaacagcagc
aacctgctccacgtattgcaacgcgggaggaccgcggacaagcagctgcaggcccagcaa
caagtgtcgggatctccgagttgcgaggcgatggaggcgtactctgcgcgtgtgctttcg
tgcttgcgcatgctactgacagggaaagattccaagtcggactggggtgaagccttgaag
cgttcgctggctgcactcggccacctcctggatgtctgcgaccaacaggacgagtcgatg
ccgatcgacggctctcttctcgagaaactgtcgtcattgctaacacacgctgtctgcttg
acaatcgtactcactcacagcacccaacatgttattgaggagaaattgagtcgcgagtcg
ttcgacgaggctttcaaagctggggcaggaagcgagcgtacacaaaaagctcttgaagcc
ggtaacgtgatggtgtcatgtgtgcttttgaagctagttgccttgctgtctgcgtcggcg
gaatccactcgcaccaagtactttgcgaatgctctgttgccagcagtgaacgtttacctg
gactggctgcaattgcaccaaaagcttctgctcaagttgaatccgggtgctgcggccttg
caagagcattgtatcgccctatttcacaccttgtccgctaatgggttcatcgagcgcggt
ctatgctgtgcgaggaagtgggacgatgacctgtcgagcgccgtgttgcccgaggatcgt
gagatgaatgggtttctgccgtacgaaaaggccctcctggcccgctttcctgaagagctg
acaccagaaaagaattcctctcgacagctgacggaagaagaacgtttggtgctgcgtgcg
acgcgatttatgacgctaagtgagagatttgtgttttcgggaaagccaccaacgccaatt
tcttgtatggagtcgggttcgtcaaaaatcacccaactggcctcaagtggtgcaatcgca
accacgattgtggacccattcgcgattgatcctgttctcaacgggcggctttgcgtcctg
tgcagtaatacgagcacttttgcagagggcgtgtgcgagttttgtggctacgaagatgag
gactgcgatgtggacactgtgtctgacgacggaggagacagcttgaatcacccttcttgg
attcagcagtacgatcttgcttacaacaataacaactcgagtcctggaacaagccctgcc
tcgccacaatcaccacctgtacgtcgaggcagctccacgtcttcgtcttcgccgcagtcg
acgcccccgatgtcaccgcccggaaagcttgagattgacttcaaaacgatcatggctatt
ggtgctgacaacgacgactttcaagatggcttgactgcaagcaaggatcaacgccggttg
attgttgtcgacgcccctaatgttgccatgaggcacggcaagggcaaagttttctcgtgt
gctggaattgaactcgcagtgaactacttccaagcgctggggcaccgcgtcgttgccttt
atcccagactacatgcttcagtccgatgacgagcgtgccgagcgcgaggaacagggggag
gtcctcacagccgcaaaaatccctgacgacgtcgcgcttcttgagcgcttggtgcacaag
ggcgtgttgattcccactcctccgcaggactacgacgactcgtactccatccagtacgcg
ggtctgcacgacggatacgtcgttacgaacgacttgttccgggaccacatcgttaacatg
gtgggtccgcgtgagcgcaaggtggccatgcgagcgtggctgcgagctcaccagatctcg
tactcgtgggtgcggaacgagttcctgccgaacccgaacttcaggtgcgaggtggcatgt
acgtaa
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