Phytophthora sojae: PHYSODRAFT_474702
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Entry
PHYSODRAFT_474702 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psoj03016
]
PHYSODRAFT_474702
Enzymes [BR:
psoj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PHYSODRAFT_474702
Transfer RNA biogenesis [BR:
psoj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHYSODRAFT_474702
Prokaryotic type
PHYSODRAFT_474702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PLD_C
Motif
Other DBs
NCBI-GeneID:
20654513
NCBI-ProteinID:
XP_009514321
JGI:
Physo3_474702
UniProt:
G4YI35
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MDSRRQGGRHYGGNNGRRFRRGGGGRGGGSGPVWFKGEGYNDHESVCIAEEVAGISGFLD
ASRAGFPGVVKQRFADFVVHELAPRSRQPVALQRVAKKGKNLQLVFQQRVLDFALGLLGV
VRALSRKLQRTSLQQQKLGQAAQEAYHLKQLVVLVTREIGAKKGKEFEQFLEKVEQARVE
FDAKRKELGDEAGTSAALAAAEGLTFYLGGLNEKGDRVFIHETMRRYGKTRIVADTLNIG
SDTAVIRVRPQFAVKLLPGERDSRRDWPVGQRKCADYLQFTLYKRNKETSAVINQLASML
KISPALFSYADVKDKRGITTQLCTVYRVPKDRAQVVFRPGGTKKLEDQQYLVGDLRYVSR
KLELGDCAGNRIAMVAVHSWETRGFINFFGLQRFGNASTSYHLLGRAMLRKDYKLAVLLL
LRPQDGEASKIRAAREHFRKHKDVAAALRMLPPFLVPERAVLEGLQQHGIDAHELAYNNI
PKPLRIAFVEAYQDFVWNEMASMRVAKFSSTAAVVGDLVLPSRKRQRTGKSTRRKPIQEV
MELTEAIVDQYSIEDVVLPLPGHAIKYPTNEVGAAYRKMLTTDGIDLNAHFGPDGSQTYQ
LDGSYRHLVKKPTRVSFRLKRYEDPTKPLIPNDKGSHRALVLEFDLDYGSDATIATRELM
KQSSSANVNWQTSNSEAASNDASKNADGSSSANAASRPGASSVQANKSNRGDTRKVITAQ
KKTQVAIGRPGFSLGRS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggactctcggcggcagggcgggcgccactacggcggcaacaatgggcgccggttccgt
cgaggcggtggcggacgcggcggcggctcgggccccgtctggttcaagggcgagggctac
aacgaccacgagagcgtgtgcatcgccgaggaggtggcgggcatctcgggcttcctggac
gcgtcgcgcgccggcttcccgggcgtcgtcaagcagcgcttcgccgacttcgtggtgcac
gagctggcgcctcgctcgcgccagcccgtggcgctgcagcgcgtggccaagaagggcaag
aacctgcagctggtgttccagcagcgcgtgctggacttcgcgctgggcctgctgggcgtc
gtgcgcgcgctctcgcgcaagctgcagcgcacgtcgctccagcagcagaagctgggccag
gcggcccaggaggcgtatcatctcaagcagctggtggtgctggtgacgcgcgagatcggc
gccaagaagggcaaggagttcgagcagttcctggagaaggtggagcaggcgcgcgtcgag
ttcgacgccaagaggaaggagctgggcgacgaggcaggcaccagcgcggcgctggcggcg
gccgagggactgacgttctacctcggagggctcaatgagaagggcgaccgagtgttcatc
cacgagaccatgaggcgctacggcaagacgaggatcgtggcggacacgctcaacattggg
agcgacacggccgtgatccgcgtcaggccgcagttcgcggtcaagctgctgcctggagag
agggacagcaggagagactggcccgttggacagcgtaagtgcgccgactacctgcagttc
acattgtacaagcgaaacaaggagacgtcggcggtgattaatcagttggcgtccatgctc
aagatctctccagctctgttctcctacgctgacgtcaaggataagcgtggaatcaccacg
cagctttgcacggtgtaccgtgtgcccaaggatcgcgcgcaagtggtgttccggccagga
ggcaccaagaaactggaagaccagcagtaccttgtcggcgacttgcgctacgtgtcgcgg
aagctggagctgggtgactgcgcaggcaaccgtattgccatggtggctgtccacagctgg
gagacacgtgggttcattaactttttcgggctgcaacgctttggcaatgcgagcacgtcg
taccacttgcttggccgagcgatgctccgcaaggactacaagctggctgtgttgctgttg
ctgcgtccccaggatggagaggccagcaagattcgtgctgcgagagaacactttagaaaa
cacaaggacgttgccgctgcactacgaatgcttccacctttcctggtgccagagcgtgca
gtgctcgaggggcttcagcagcacggcattgatgcgcacgagctggcgtataacaatatc
ccgaaaccactgcgcatagcgtttgtggaagcgtaccaggacttcgtgtggaacgagatg
gcgagcatgcgagtggcgaagttctcgtcaacggccgctgttgtgggtgacctggtgctc
ccatctaggaaacgtcagagaaccggaaagagcacgaggaggaagccgattcaggaagtt
atggaactcacagaagctatcgtggaccagtactcgattgaggacgtggtgttgccacta
ccaggtcacgcgatcaagtacccgaccaacgaagtaggagccgcctaccgaaaaatgctg
acgacggatggcatcgacctcaacgcccacttcggaccggacggcagccagacctaccaa
ctggatggatcataccgccacttggttaaaaagccgacacgcgtgtcattccggttgaag
cgttacgaggacccgacgaagccgttgattccgaacgataaaggatcgcaccgcgcgctt
gtacttgagttcgatctggactacggctccgacgcgaccatcgctacccgcgagctgatg
aagcagagcagcagcgcaaatgtgaactggcagacttcgaactcagaggcagccagcaac
gatgcgtcgaagaatgcggacggatcctcatctgcaaatgctgcttcaaggccaggtgct
tccagcgtgcaggcaaacaagtccaatcgtggtgacactcgcaaggtcatcaccgctcag
aagaaaacgcaagtggcgatcggccgtccaggtttcagtctgggaagatcgtaa
DBGET
integrated database retrieval system
