Phytophthora sojae: PHYSODRAFT_476181
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Entry
PHYSODRAFT_476181 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
psoj
Phytophthora sojae
Pathway
psoj04120
Ubiquitin mediated proteolysis
psoj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHYSODRAFT_476181
04120 Ubiquitin mediated proteolysis
PHYSODRAFT_476181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psoj04121
]
PHYSODRAFT_476181
Enzymes [BR:
psoj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PHYSODRAFT_476181
Ubiquitin system [BR:
psoj04121
]
Ubiquitin ligases (E3)
U-box type E3
PHYSODRAFT_476181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
CGLD27-like
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
20654708
NCBI-ProteinID:
XP_009516944
JGI:
Physo3_476181
UniProt:
G4YHU2
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MSGWVSAWLQGKSEGDEEGKTEEGGFGSAGNTLSDGAAPASADEIRRKRLQKLQEAQAAV
SANPSPPNPKDDVIMANPEAPSDKKQRVGTTPEVYVNDMLQRVLRVTLTPANSSSDLLLL
PQFAAQMEGEQDLLLSTANASEVLYSRVIMNPADLPGGSQHPLAALAYLEQVFYRCRDEM
QKLQSSFVRLSAEQKQEAQECLSSIREMCINYSATALTDPEIFPFEAGTINADALEKIVR
LQGNAQTPEFVDGVVAQLEASDGTLAVFAPIFQKLLSELFLINPPSLMSNFYNNMFVLTV
LCRNKALATAFTQIPGFLLTPGPPMTGRRLQDATALGLLLRFSCGQDAAITQMFTNITKR
TKNDVDNSILTIRNKLDSVQTTVSDIITLLLKAGGIAREQVLVWLEQAMQVNAERAKENP
DANITATNGMFVNLTMVLLKLCGPFLAAKSKKAQLIKAEYLTKLNPLFPFNETRLIGAGS
EIAVAQQDDRQPLSPAEFNFISRCYFITARAMHLGPVGIMGQYMRLLRQLSYFQSRMNAP
NADPRLRAHFDQMAAAKMIMDAELLHPDFLHEMIRFSLLTCGVVNSMCTGSSVYGESASL
QLPLPAPDTKANQVLKYIPEHLVDDLCTALKFVARLQPKALNAFELNELLKMIIVFLSSP
GYVHSPHLRAKMSEVLFHIFLPSEESEERETAGTAFGVELLMTNSLAQRHLAPCLLGLYG
DVEHTGFYEKLEHRYNIACLLKYLWKLDGHKPAFLLIAEDRENFVKFAHGLMNHINSLVT
DALIALPEIKVLQEEMQDVARWMALDETVREQKQSLLSDKERTVTSSLQLANETIHMMSY
LTSEIQEPFVKMPELEDRLVSMLNSVLVKLAGPRGVELKVNNPEQYKFRPKTMLKEIVET
LLHFAHYPSFLEAVATNGFYDGQVFRKCAHIVARTQLLVPSDVQKFEAFVADVEKAAEGA
ANLEETLGDIPEEFLDPLVFTLMKDPVLLPSGYTMDRSCITQHLMNDQSDPFTRVPLTME
QLQPNTDLKAKIEQWIQEQQQKQKDAAK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctgggtgagcgcgtggctgcagggcaagagcgagggagacgaggagggcaag
accgaggagggaggcttcggctcggcgggcaacacgctctcggatggcgcggcgcccgcg
tctgccgacgagatccggcgcaagcggctgcagaagctgcaggaggcccaggccgccgtt
tcagccaatccgagcccgccaaacccgaaagatgacgtcataatggccaatccggaggcg
ccgtccgacaagaagcagcgcgtgggcaccacgcccgaagtttacgtcaacgacatgctg
cagcgcgtgttgcgcgtgacgctgacgcccgccaacagcagcagcgacctgctgctcctg
ccgcagttcgcagcccaaatggaaggcgagcaagatctgctgctgtcaacagccaacgcc
agtgaagtgctctactctcgggtcattatgaaccctgctgacctccctggaggctcgcag
caccccctggctgctctggcctacctggaacaggtcttctaccgctgccgggacgagatg
cagaagctgcagtcgtcctttgtgcggctgtcggcggagcagaagcaggaggcgcaggag
tgtctgagcagcatccgcgagatgtgcatcaactacagcgccacggcgttgacggacccg
gagattttccctttcgaagcagggacgatcaatgccgacgcactggagaaaattgtgaga
ctgcagggcaatgcgcagacgccagagttcgtggacggagtcgtggcacaactggaggcg
agtgacgggacgctggctgtgttcgccccgatattccagaagttgctgtccgagctgttt
ttgatcaacccgccgtcgctcatgtccaacttttacaacaacatgtttgtgctgacggtg
ctgtgccgcaacaaggcgctggccacggcgttcacgcagatcccgggatttttgctgact
ccgggtcctccgatgacgggacgacgtctccaggatgcgactgcgctggggttgctgctg
cgcttcagctgtggccaggacgcggccatcacgcaaatgtttaccaacatcacgaagcgc
accaagaacgatgtggataactcaatcctgactattcgcaacaagttggacagcgtgcag
accacggtgtctgacatcatcacgttgctgctgaaagctggtgggatcgctcgtgaacag
gtgctggtgtggttggaacaagcgatgcaggttaacgccgaacgtgccaaggagaacccg
gatgctaacatcacggccacgaatggcatgttcgtcaacttgacgatggttctgcttaaa
ctgtgtggtccgttcctggccgcaaagtcgaagaaagcccagctgatcaaggccgagtac
ctgacaaagctgaacccgttgttcccatttaacgagacaaggttgatcggtgctggctca
gaaattgcagtcgcacaacaagatgatcgccagccgttgagccctgcggaattcaacttc
atctcccgttgctatttcattacagctcgggcaatgcaccttggacctgtgggcatcatg
gggcagtatatgcgtctgctgcgtcaactttcgtacttccagagtcgtatgaacgctccg
aacgcggatccacgcttacgggcacactttgaccaaatggccgctgcaaagatgatcatg
gacgctgagctgcttcaccctgacttcttgcacgagatgattcggttctcgctgcttact
tgcggcgttgtgaactccatgtgtactggatcgagtgtgtatggtgagagtgcctcactc
cagttgcctttgccagcacctgataccaaggcaaatcaagtcctcaagtacattcctgaa
catttagtggacgacctgtgcaccgcactgaagtttgttgcgagactacaaccgaaggcg
ctcaatgcgttcgagctgaacgagttgctcaagatgatcattgtcttcctgtccagcccg
ggatatgtccatagccctcatttgcgtgccaagatgagcgaggttctgtttcatattttc
ttgccgtccgaggagtctgaagagcgtgagaccgctggaaccgctttcggagtggagctg
cttatgactaactcgctggcacagcggcacctcgcgccgtgccttttggggttgtacggt
gacgttgagcacacgggtttttacgagaagcttgagcaccgctacaacattgcttgtctg
ctgaaatacttgtggaagctggatggtcataagccggcattccttctgattgccgaggat
cgagaaaattttgtgaaattcgctcacggactgatgaaccacatcaacagtttggtgacg
gatgcgctcatcgctctcccggagatcaaggtgctccaggaagaaatgcaggacgttgcg
cgttggatggctcttgatgaaactgtacgcgagcaaaagcaaagcctgctttcagacaag
gaacgcacagtcacatcgagtttgcagctggccaacgagaccatccacatgatgtcgtac
ctgacgtctgaaatccaggagccattcgtaaaaatgccggagcttgaagaccgcctcgtg
agtatgctgaacagtgtgctggtcaagcttgcgggtcctcgtggtgtggaactgaaggtg
aacaaccctgaacagtacaagttccgtcccaagacaatgctgaaggaaattgtggagacg
ctgctgcactttgcccactacccgagcttcctggaggctgtggctaccaatggcttctac
gatggccaggtcttccggaaatgcgctcacattgtggcccgcactcagttgttggtgcca
agcgacgtgcaaaagtttgaggctttcgttgcggacgtggagaaggctgcagagggtgca
gcgaatctggaggagacgctgggtgacattcccgaggagttccttgacccattggtgttt
acgctgatgaaagaccccgtgcttctgcccagcggctacacgatggaccggtcgtgtatc
acacagcacttgatgaatgatcagagcgacccgttcactcgtgtccccctcaccatggag
caattgcagccgaatacggatctgaaggcgaaaattgagcagtggattcaggagcagcag
cagaagcagaaagatgctgctaagtag
DBGET
integrated database retrieval system