Phytophthora sojae: PHYSODRAFT_481346
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Entry
PHYSODRAFT_481346 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_481346
Enzymes [BR:
psoj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PHYSODRAFT_481346
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PHYSODRAFT_481346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
20655362
NCBI-ProteinID:
XP_009518956
JGI:
Physo3_481346
UniProt:
G4YUZ8
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MKRSLRLVTWNVNGLRAVLQRLGQNLQQFLEGLEADIICLQETKMTRSELDQELVRPPGF
DAFYSFCRHRGGYSGVVTFVKSDLPTVAAEEGLTGLWQAKDSVGHLGSLQNELSSKLVSD
LEAEGRCVITDHQAFVLLNTYCPALASADRLEYKLQFHALLEDRVRALRRANKRVVVVGD
INIAHREIDHCDPDTHRADGSSFADHPCRRWMDGFVGKPEEQDCNFYSEPKSGYEFKMVD
AFRHFYPTQTKAFTCWNTQTGARQTNYGTRIDYILVDPAFLQSVTACSIEADRLGSDHCP
VVISCTVELETDSSINRGITAALSAKNFVEFSGTQQSIKSFKRINQCQQSITSFFSSAGI
KRKSPPADKWVGGDDDSSAYQLFSSGVQIVHRSSKRKTAEEGKLEWQQVLSGRPPPTPLC
YCGQPTVLRSVVKANENWGRKFYVCTKPAGERGNPDARCEFFKWADNKGPKKPKAQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtcgctgcggctcgtgacttggaacgtcaatgggctgcgcgccgtgctgcag
cgtctggggcagaatctgcagcagtttctggagggtctggaggcggatattatctgcctg
caggagaccaagatgacgcggtcggagctcgatcaggagctggtgcgcccgccaggattc
gacgcattttactcgttttgtcgacatcgtggaggctattcgggtgtggtaacgttcgtc
aagagcgatctgccgactgtagcggcggaagaagggctgacggggctctggcaggccaaa
gacagcgtggggcacctcgggtctttgcaaaacgagctttcctcgaagctagtgagtgac
ttggaggccgaggggcgctgtgtcattaccgaccaccaagcgtttgtgctactcaacacc
tactgcccagcacttgcttcagctgatcgactggagtataaactccagtttcatgctttg
ttggaagaccgagttagggctctacggcgggcgaacaaacgcgtcgtagttgtgggagat
attaacattgcacaccgcgaaattgatcactgtgatcctgatacccatcgagcggatggt
agctcttttgccgaccatccctgcagaaggtggatggatggctttgttggaaaaccagaa
gagcaggattgcaatttttattctgagccgaaatctgggtacgagtttaaaatggttgat
gcattccggcacttctatcctacgcagactaaagcattcacgtgctggaatacgcaaaca
ggggcacgccaaacaaactatggtactcgtattgactacatattggtagaccccgcattt
cttcagtctgtaactgcgtgcagtatcgaagcagaccgccttggatctgatcattgcccc
gtggtcatatcttgcaccgtagagctcgaaaccgattcgagcatcaaccgtgggatcact
gcagcattgtccgcaaagaacttcgtcgagttctctggcacacagcagagtattaagtcg
ttcaaacggataaaccaatgccaacagtcgatcacttccttcttcagcagtgcagggatc
aaacggaagtcacctccagcggataaatgggttggcggtgatgatgattcaagtgcttat
caacttttttcaagcggtgtacaaattgtgcatcggtcgagcaagcgaaaaactgcggaa
gaaggaaaactcgagtggcaacaagtgcttagtgggcggcctcctccaacgccattatgt
tattgcggtcaaccgactgttcttcgctcagttgtgaaagcaaacgagaactggggacgc
aagttttacgtttgtaccaaaccagcgggcgagaggggcaaccctgatgcaagatgcgaa
ttcttcaagtgggccgacaacaaaggccccaagaaaccaaaggctcagtga
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