Phytophthora sojae: PHYSODRAFT_485111
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Entry
PHYSODRAFT_485111 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K13133
gem associated protein 5
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_485111
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_485111
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PHYSODRAFT_485111
mRNA cycle factors
P-body specific factors
PHYSODRAFT_485111
Spliceosome [BR:
psoj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
PHYSODRAFT_485111
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
TPR_GEMI5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_RIG_1st
EIF3I
ASA1
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_NOL10_N
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_Vps41
BBS2_Mid
PAC11
Beta-prop_SCAP
Hyccin
TPR_4
Motif
Other DBs
NCBI-GeneID:
20655848
NCBI-ProteinID:
XP_009519646
JGI:
Physo3_485111
UniProt:
G4YV59
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MIEQHRKHKAEVMAIAVSDTLDANFVVAGDRQGRISAWERDAYLTVFLMTIGDCRGKVSM
FMPVSGDGIHSMAISPHDKALVAVGYRSGVLCLVDAAKGTVRHRLAGHDQEVQCVAWKAT
LKVNNPVEGDEEDVGEPDKAGRDVWLASSSRDKTIKVWKLASTSAEEPALDQVLRLPTGK
QGMSFTQTKQLWLSVAWSVNDNALARHCLWSGSFDGSLLRWEWSADKSEDQGKKGKKRTP
CKPVAVKGGHNRMLFSIVMVPPRSTALPQDDAVSMLTVSLDRELRLWQENPPSKSSPAAT
YVEKLTGLGGHAYSVSHNVATGLVAAGVGDQTIRLWNLGTDGASTTSDYQCELLWKGLQS
KVTCVRWHPFQHSLLAYSMEDGRIGVYDTQTNKYSHFRTSHDHEVEQLQWIVQQSKASES
ADDGDSSFLDSMKQLEAAQAQGQSLEEALTSQEKQTSKGRDGDEVRVFLWSRDAGGHLLE
SNADAIDQKSREVVSGCVAFEWDEHCELLAIGRSNGVVEVLKWEGSFDTSSAIHRFHEHL
EGVTCLAWGSGGHAGLLASGGEDGKIFVYGCGDETNALDDLGTSAEPGLGNQILGSIAAH
SNKIMGLRWCPDVAQGRLASCSSDGTVQVWETASFRREAHFSHHVGRVLSLEWVSPFVLV
TGGEDQTLRLWDCREQPKDPLSKQKKPSKVKQPQEVETIQEFFATEVKRFRDDREWENLA
NMLLLQGNIAEALRVVAKEGALSPTYLSYAPMAGMDVWREMTNLYAHQLDAQGDKKAAAL
HFLSIAKVRSAVACLVSGDAYQEAIALVRSRLGPHDPLLYGTLWKYSQFLSKRGRHGEAA
LALLNIGSVKATTRAVHMLVNTGEMVSIKAALDVLLAAAKSPAKIRHQGEGSEKGGEELS
FPASFFISIAGKALAKSRFDIAETVASLLQSPLVGASFSPVHRLTCCLLGIVKTLDEHRQ
FHCKLENDGTQVGNRADHFYSQILSVCQGSGYWFDAEGETRVQEAQDLLVETNCFNDIEK
AVAAASERPGSATSVLLQVSQRLLRFTIDVMSGSFIGGLEHMREAFLLLAQCEDSTGSLR
LEVMTLLYPCGFASPKSLPQCGELADEQGDTLVLWSSSLLSQCRVVLSTSTTTAKTNTTE
GLMPSPESLIVSLLHLLRGSFLDDNNVLMCEGLKDVGNQSQLQTLLNEMLVAAQLLQEEP
AKQDEESKHCVSRKQALIDKVKEMRSSLTWSSDEGVE
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagcagcaccgaaagcacaaggcggaggtgatggcgatcgccgtgtctgacacg
cttgacgcgaattttgtggtggcgggagatcgacaaggacgcatcagcgcgtgggaacgg
gacgcgtacctaaccgtgttcctcatgacgattggtgattgcagagggaaggtgtcaatg
ttcatgccggtatcaggcgacggtatccactcgatggctatttcaccgcatgataaagca
ctcgtagcggtaggttatcgtagtggagtgctttgtctcgtggatgctgcgaaaggtact
gtacgtcaccgtctagctgggcacgaccaggaagttcagtgcgttgcttggaaggcgacg
ttaaaagtcaacaaccccgtggaaggagatgaggaagacgtcggtgaacctgataaggct
ggtcgagatgtatggcttgcatcgtcgtctcgggataaaactatcaaggtgtggaagctt
gcatcgacttcagctgaagaacccgccttggatcaagtgctgcgacttccaacaggaaag
caggggatgtcgtttacccagacaaaacaattatggctatctgtggcgtggagcgttaac
gataacgctttagcgaggcattgcctttggtcgggatcattcgatggcagtctgctgcgc
tgggaatggagtgcagacaagtcggaagaccaggggaagaaagggaagaagcgcactccg
tgcaagcctgtagccgtcaaaggtggccataaccgaatgcttttcagcatcgtgatggtg
cccccgcgaagtactgctctgcctcaagacgatgcagtgtcgatgctgactgtatcgctg
gatcgagagctgcgcctttggcaggagaacccgccctcaaaatcatcgcctgctgcgact
tatgtcgagaagctgactgggttaggaggacacgcttacagcgtttcgcataacgtagca
actggactcgttgccgccggagttggagatcagacgattcggctgtggaatttaggtacc
gatggtgcatctacaacgagtgactaccaatgcgaactgctttggaagggcttgcagagc
aaggttacgtgcgttcggtggcatcccttccagcattcattgctggcgtacagcatggaa
gacggacgcattggggtttacgacactcaaaccaacaagtacagccatttccgtaccagt
cacgatcacgaggtcgagcaactccaatggattgtacagcagtcgaaggccagtgagagt
gctgatgatggagatagctcgtttctcgacagcatgaagcaactggaagctgcacaagcg
caaggtcagagtctggaggaggctttaacttcccaggaaaaacagacaagtaagggccgc
gatggggacgaggtgagggttttcttgtggagccgcgacgctggtggtcatttgttggaa
tcaaatgcagatgcgatcgaccagaaatctcgtgaggtagtctctggttgtgtcgcgttt
gaatgggacgagcactgtgagcttctcgccatcgggcgctctaacggcgtcgtggaagta
ttgaaatgggagggaagttttgacactagcagtgcgattcatcgctttcacgagcatttg
gagggggtaacgtgcttggcgtggggtagtggaggacatgctggtttgctggcatccggc
ggtgaagatggtaaaatctttgtctacggttgtggagatgaaacgaacgcactagatgac
ttgggcacatcagctgagccgggtctaggaaaccaaattctcggcagtattgcagcccac
tcgaacaaaatcatgggtttaaggtggtgccccgacgtagcccaaggccgcttggcctct
tgttcttctgatggaactgttcaagtttgggaaacagcatctttccggagggaagcacac
ttcagccaccacgttggtcgcgttttatcactggagtgggtctcgccgttcgttcttgtt
actggaggtgaggaccaaacactgcgcctctgggactgtagggagcagcccaaagatcct
ctgtcgaagcaaaagaagcctagcaaggtgaaacagccccaagaagttgaaacaattcag
gaattctttgctaccgaagtgaagcgctttcgagatgaccgtgaatgggagaacctcgcc
aacatgctactgctgcagggaaacattgcggaggccctgcgcgttgttgcaaaggaagga
gctctttcacccacctacctttcgtatgctccaatggctgggatggacgtgtggcgagag
atgacgaacttgtatgcccaccagctcgatgcgcaaggagacaagaaagctgcagcgttg
catttcctcagcatcgcgaaggttcgatctgccgtcgcgtgcttggtgagtggggatgcc
taccaggaagctatagcgctcgttcgatctaggttggggccccacgatcctctcctatac
ggcaccttgtggaaatactcgcagttcctctcgaagcgcggtcggcatggagaggccgcc
ttggcgctgttgaacattggctccgtgaaggccacgacgcgggcggttcacatgcttgtg
aacacaggcgagatggtctccattaaagctgccctcgacgttctgctagcggcagcgaag
tctccggcgaagatcagacatcaaggagagggctctgaaaaaggaggtgaggagctttcg
tttcccgcgagctttttcatctcaattgcgggtaaagctctcgcaaaatcccgctttgac
attgctgaaacagtggcgagtttgcttcaatcgccgctggtaggggcctcgttctccccg
gtgcaccgcttaacatgctgtcttctcggaatcgtcaagacacttgatgagcaccggcaa
ttccattgcaaacttgagaatgatggcacccaggtcggaaatcgtgctgatcatttctac
tcgcaaatactgagcgtatgtcaaggaagtggttactggtttgatgctgagggggaaact
cgcgtacaagaagcgcaggacttgctagtggaaaccaactgcttcaatgatatcgagaag
gctgttgcagctgctagtgaacgacctggaagcgcaactagtgtgttgttgcaagtctcc
cagaggttgctgcgcttcacgattgatgtgatgagcgggagttttattggcggtctcgag
catatgcgagaggcattcttgcttttggcgcagtgcgaggattccactggtagtttacgc
ctcgaagtgatgacactgctgtatccgtgcggtttcgcgtctccgaaatcgctccctcaa
tgcggcgagctcgcagacgagcagggggacacactcgtgctatggagctcgagtttgctc
tctcagtgccgagtggttctgtcaacgtccacaacgactgccaagaccaacactacagag
ggcttgatgccgagtccggagtcactgatcgtgtcgttgctccatctacttcgtggttcg
ttcctcgacgataacaacgtgctgatgtgcgaaggcttgaaggatgttgggaatcagtcg
caactacaaactttgctgaacgagatgctggtagctgcacaactgctacaggaagagcct
gctaaacaagacgaagaaagcaaacactgcgtgtccagaaagcaagctcttatagataaa
gtgaaggagatgcgatcgagtcttacgtggagcagcgacgaaggcgtcgagtaa
DBGET
integrated database retrieval system