Phytophthora sojae: PHYSODRAFT_487732
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Entry
PHYSODRAFT_487732 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psoj04121
]
PHYSODRAFT_487732
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_487732
Enzymes [BR:
psoj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PHYSODRAFT_487732
Ubiquitin system [BR:
psoj04121
]
Ubiquitin ligases (E3)
Atypical E3
PHYSODRAFT_487732
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
PHYSODRAFT_487732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
zf-RING_2
C1_1
Zn_ribbon_10
zf-C3H1
DUF7474
zf-C2H2_DHX34
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
20656195
NCBI-ProteinID:
XP_009519486
JGI:
Physo3_487732
UniProt:
G4YSS6
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MNDSDRMLLQRIMAAGAMEDQEVRRLARKLTGEDLTASDVDDMVKKVAENIRPFALDMRR
GMYDDGKMYLAVVNTSNDSLTAFGSNFKSWEIVFLRKVMEEIVDTEEGALEEAYLFNLRE
NTKIDEVEELLRKLTAEKWLAPSAVPMPTRSFTLGPRAYLELIAFLRDMQIKKCPICQYE
LLQGAKCQDRNCETVVHNGCVDKFENRGVRYKCPTCKKQLRR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactcggaccgcatgctgctccagcgcatcatggcggcaggagcgatggaggac
caggaggtgcggcggttggccaggaagctcacaggcgaagatctcactgcctcagacgtg
gacgatatggtgaagaaagtggcggagaacatccgcccttttgcgctcgacatgcgtcgc
ggcatgtacgacgacggaaagatgtacctggccgtggtcaacacaagcaacgactccctg
acggcgtttggtagcaacttcaagtcgtgggaaatcgtgttcctgcgcaaggtgatggag
gagatcgtggatacggaagaaggagcgctggaggaggcgtatctgttcaaccttcgcgaa
aacaccaaaattgacgaggtggaggagttgcttcggaagctgacagctgaaaagtggcta
gctccgagtgccgtgccaatgccgacccgcagttttacgctgggtccgcgtgcatactta
gaacttatcgcgttcctgcgcgacatgcagatcaagaagtgcccaatttgccagtacgag
ctgcttcagggtgcgaaatgccaggatcggaactgtgagaccgtggtccacaatggctgc
gttgacaagtttgagaacagaggagtacgctacaagtgccctacatgcaagaaacagttg
cggcgataa
DBGET
integrated database retrieval system
