Phytophthora sojae: PHYSODRAFT_489603
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Entry
PHYSODRAFT_489603 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_489603
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PHYSODRAFT_489603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DUF3535
ResIII
HDA2-3
DEAD
HEAT_EZ
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
20656449
NCBI-ProteinID:
XP_009524445
JGI:
Physo3_489603
UniProt:
G4Z6B3
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MFDSKWEVRHGAVLSLRQILLSVQFTAAVEAARPTEDVSAQRSFVDKWLEECLIRCICVL
ALDQFVDYSADGSVSPVREVCAQVFGILLGSLSSEETLVGYLQVVRTLFSGSTWQACHGG
LLGLKYLVRAHSNHAKVLVPRFYDDIVTAFSQSDSEEDVLVLAAEMFKDFAPYLDRVEDT
GIKKAAQLLWGSLKLHEKAGLVSASIVEALSAWYNHAPVATVLQNDSEVSRSLWQNLSYT
VPMLHHHSSSVRASSGICVAAIFSGEVSCFSSSSVDFARVFLPHLLLQLLLEKDESVQQS
LLAAWKKVVSSLSEGEMLMSIIAEPLLRWTKLLWSTDDINYLNNMSSRVAFAEAIGFVLA
HVPLSGACMTDLVKLFRDGMSSSSGARQCGILLALSKWSCFEKQLAQEKLDTQSQRVQHL
LDSMGPTLSSFAGNQWITLHPDAVSDGRPVFYSEQLGSLKRVKQMEARIVEILSAVGISV
QPAGRPDSASSADISRQIAEHVALFPYDQLQNRPKEYESAHFKRQDLFLVDELVQQSFSR
FYHRIQGLGSSAFCELLPIPKKSGFLVKALMNSIKEEEEQVFRTISSQTIANFVVDQAHV
QKKCVSKIISNLCNSAGALKTKVRVAGAEATLRQLCKRAGGSLFETCSALEDNISKAWNE
PNADVLTIQRSMHLIVLMMSHVESGAMPTCLSWFDQLAQLIQRPYDNHRTRRIVAHAVAT
ICKYAQGEHRESAMLVVYNSIFVAFTRTGSVDATEVLEGAVMVLDRIVHSLGSDLMPYVP
SMVHYAMKTMSSQFKLVRTLAAGAFADLVPLIPLQMDLELHDSNKLLPDALRTIVSQNAV
SRTFLESFTEGKAIQHVDVKSWLAPDISIRVYQQHGVDWLCFMANNNLHGILADDMGLGK
TLQSLSAMAATLSMSSSILEEGRACLIVCPPIIVHHWIQEAKKYLPGFFESIIDYSLPAS
ERKALNRKGGLPILDHGPTLIVTTYAILRTDIEFLSGIDYSFVVLDEAHLIRNPSTALFR
AVLELRAVHRVALSGTPLQNNVTDLWALFEFLMPGYLGEFVDFRREFVLPITKSKERNAT
TKQKELAAIAIAQLHQKVLPFILRRTKDQVLEELPPKIISNVLLPLSSLQKRLYSLASSA
ETEATASSRSTNAKKPDTKPLTNVLTNLQLLRKICVHPALVADNAVTRGLNSKEMKALGD
WKSSGKMTGLRDLLVECCDVAAWDQGSREGSGADADNLDETNLSPHRCLVFAHLQRTLDL
TEQMLRDALPGVTYRRLDGQTPHAKRADIVQHFNADPSIDVLLLTTSVGGLGLTLTGADT
VIFIEHSWNPFVDLQAMDRAHRIGQKRTVRVFRLIMEESLEEHILNLQEFKEQVAATVVR
KSDAQTSMNTNTKGVLNLLQASSSAVAAKELRASVAAKKAGDSDDNIAAALPQGAQELLN
QIGDLWDESQYDSLAFPESTNE
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattccaagtgggaggttcgccacggcgcagttttgtcgctgcgtcagattcta
ctgtctgtgcaattcaccgctgctgttgaagctgctcggccaactgaagacgtgagtgca
cagcggagtttcgtggacaagtggctggaagagtgtttgatcaggtgcatttgcgttctc
gctctggatcaatttgtggattattcggcggacgggtcggtgtcgcccgtccgagaggtt
tgcgcgcaagtctttggcattttgcttggaagcctctcgagtgaggagacgctggtcggg
tatttgcaagtggtgcgcacgttgttcagtggttcgacatggcaggcttgtcacggtggc
cttctggggctgaagtatcttgtgcgagcccatagcaaccacgccaaggttctcgttcct
cgcttctacgacgatatcgtgactgccttttctcaatccgattcggaggaagacgtgcta
gttctggctgcagaaatgtttaaagattttgcgccatacttggatcgagttgaggataca
gggatcaagaaagctgctcaactgctctgggggtctctaaagctgcacgaaaaagctggt
ctagtgagtgcaagcatcgttgaagcattaagcgcctggtataaccacgcccccgtggca
accgttttgcaaaatgacagtgaagtcagtcgttcactgtggcaaaatctgtcgtacaca
gtcccgatgttgcatcaccattcgtcgtcagttcgagcatccagtggaatttgcgtcgca
gccatcttttcaggggaggtttcgtgtttcagttcgagctcggtcgactttgctcgagtt
tttctgccacatttgctgcttcagctgctgctggaaaaggacgaatcggtccagcaaagt
ctgcttgctgcgtggaagaaagtggtgagcagcctgtcggagggtgagatgctgatgtct
atcattgcagagccactgctaagatggacgaagctcttgtggtcgacagacgacattaat
tatctaaacaatatgtcttcgcgtgtggcgttcgcggaagcgattggctttgttttggct
cacgttcctctctccggtgcgtgcatgactgatctagtgaagctgttccgagatggcatg
agtagtagctcaggtgcgcgacagtgtgggattttgctagcgttgtcgaagtggagttgc
tttgaaaagcagttggcacaggaaaaattggacacacagtcacaacgagtccagcatctc
ttggattcgatggggcccacactgagctcgttcgcggggaaccagtggataacgcttcac
cctgacgcagtgagcgacggaaggccggtcttctacagtgaacaacttggatcactaaaa
cgcgtgaagcagatggaagctcgaatcgtcgagatattatccgccgtgggtatctcggta
caacccgcggggcgacccgattcagcttcatcagcagacatctcacgacagatcgctgag
cacgttgctcttttcccgtacgaccagttgcaaaaccgcccgaaagaatacgaatccgcc
cacttcaaacgacaagatctcttccttgtggacgagctcgttcagcaaagtttttctcgc
ttttatcatcggatacaaggactcgggagcagtgctttctgtgagctactgccgattccc
aaaaagagtggatttctagttaaggcgttgatgaactcgatcaaggaagaagaggagcaa
gtgtttcgcactatttcgtcccaaacaatcgcgaactttgtggtggaccaggcacacgtt
caaaagaaatgtgtatcgaagattatctcaaacctgtgcaacagtgctggggccttgaag
accaaagttcgagtagctggagcagaggcgactctgcgccaactatgtaagcgcgctggt
ggatctcttttcgaaacatgcagtgcattggaggacaatatttccaaggcgtggaacgag
ccaaatgccgacgtgttgactattcaacgaagcatgcacctgatcgtgttgatgatgtcc
catgttgagagtggggcgatgccaacctgcttgtcgtggtttgaccaacttgcgcaattg
attcaacgaccttatgataaccatcggacgcggcggattgtggcgcatgctgtcgctacc
atttgcaagtacgcgcaaggagagcaccgcgagagtgctatgcttgttgtgtataactcg
atttttgtagcgtttacacggactggtagcgtcgacgcaacagaagtactcgaaggtgct
gtgatggtactcgatcggatcgtccacagccttggatccgacctgatgccgtatgttcct
agtatggttcattacgcgatgaagactatgagctcccagttcaaacttgtccgcactctc
gctgctggggcttttgcggacctggtgccgctgataccacttcaaatggacctggagctt
catgactctaacaagcttctcccagacgcgctgagaacgattgtgagccagaacgcagtt
tctcgtaccttccttgagagcttcacggaagggaaagctattcagcacgtcgacgttaaa
tcttggctggctccagatatctctatccgtgtgtaccaacagcacggcgtcgattggttg
tgcttcatggctaacaacaatctccacggaattcttgctgatgatatgggcctcggaaag
acactgcagtcgctttctgcgatggctgcaacgctctcgatgtcctcctctatcctcgaa
gaaggccgtgcgtgtcttattgtatgcccgccgatcatagttcaccactggatccaggag
gccaagaaatacctgccagggttctttgaatctatcatcgactactcgttgccagctagc
gagcgaaaggctctgaatcgcaaggggggtctgccaatattggatcacgggccgacattg
atcgtgacaacgtacgcgatcttgcgtacagatatcgagttcttaagcggtatcgactac
tcttttgtggtgctggacgaagcacacctaatccggaacccttcgactgctctgtttcgt
gccgtgctcgaacttcgtgcagttcaccgagttgcgttgagtggaacaccgctgcagaat
aacgtcaccgacctgtgggcgctgttcgagttcctgatgccaggttatttgggcgagttt
gtggatttccggcgtgagtttgttcttccgatcaccaagtcaaaggagcggaatgccaca
acaaagcagaaggagctagcggcaatcgctatcgctcaactgcatcaaaaagtcctgccg
tttattctacgacgaacgaaagaccaggtgctggaggaacttcctccaaaaatcatctcg
aatgtgctgctgccgctgtcgtcactgcagaagcgtctctactctctggcgtcgtcagct
gagacagaagcaacggcgtcctcgcgttcgactaacgccaagaaacccgatacgaagccg
ttgacgaacgtgctgacaaacctccaacttttgcgcaagatttgtgtccaccccgcgctt
gttgccgacaacgcagttactcgaggtctcaattcgaaggagatgaaggctcttggcgac
tggaagagctctggaaagatgacgggcttgcgcgatctcttggttgaatgctgcgatgtt
gcagcgtgggatcagggcagccgcgagggctctggtgctgacgctgataacctcgacgag
accaacctgtctcctcatcggtgtctggtattcgcgcacctgcagagaacacttgacctc
accgagcaaatgttgcgagacgctttacctggagttacctatcggcgccttgatggccaa
acgcctcacgccaagcgcgcagatattgtgcagcacttcaatgctgatccatccattgac
gttctgctgctgacgacgtcagtgggcggcctagggctcactctcactggcgctgatacg
gtaatcttcatcgagcactcgtggaacccctttgtcgatctgcaggccatggatcgtgcg
catcgcattgggcagaagagaactgtgcgtgtgttccggttgatcatggaggagtcactg
gaggagcacattctgaatctccaggagttcaaggaacaagttgcagctacggtggtaagg
aagagtgacgcgcagacgagtatgaacaccaacacgaaaggtgtcctcaacttgttgcag
gcgtcgtcgtctgccgtggctgctaaggagctccgagcgtcagttgctgcgaagaaagca
ggcgacagcgacgataatatcgcggcagcacttccccagggagcccaagagttgttgaac
cagattggagacctatgggatgagtcccagtacgattcgttagcatttcccgagtccacc
aatgaataa
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