Phytophthora sojae: PHYSODRAFT_489952
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Entry
PHYSODRAFT_489952 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
psoj
Phytophthora sojae
Pathway
psoj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PHYSODRAFT_489952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_489952
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
PHYSODRAFT_489952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Tmem26
Motif
Other DBs
NCBI-GeneID:
20656492
NCBI-ProteinID:
XP_009522776
JGI:
Physo3_489952
UniProt:
G4Z330
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MDDDEEEFAYSEGELDDEEEDDVDWEDQIDWDQVNQSLAEQDAASVARKRRRAPIRLTKD
EKEREKALHQTHLLVLLATRIKWSTVSRSQLLRGLLLSLTAGSDVDFFAEMKQQPLSYSL
ELLVRCLMNFFFARKGRDYELTVLFAALCGALQLRYRLTCALDPLLVQKGKAFESSFKQK
PTKRRRARKIADTILKKKKKIGVFWLWCEVLDEKTKSWIHVDVVRRLVGRPQEVEPLRGK
AARFSYVISIQDNELLVDVTSRYTVQWSKSLELRLADSWLKQVIERFNDDAMIQRGALED
EKKSLETLKLDEGMPTSVEGFRKHHLYCLERHLGQLECLHPRKVVGLFNGQPVFLREHIQ
PLQSAFKWRRLGRVVKESEREKPAKWKSRGSDPSSKPAGESDGSDGEDGKSGAGGALFGL
WQTTEFEPPPMVDGRVPKNQYGNIEIWSSAHVPRGAVHLRLPRIDTIAESLGIDFAPAVV
GFEVRNGRTMPKVAGIIVAQSHEATLLDAHAERQQQTIEKAIEHNCKLVLKRWAKLTKRL
LLRQRLEDDYGAV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacgaggaggaattcgcgtactctgaaggcgagctggacgacgaggaagag
gacgacgtggactgggaggaccaaattgactgggaccaagtgaaccagtcgttggccgaa
caggacgcagcctcagtagctcgcaaaaggcgacgggcgcccatccgtctcacgaaggac
gagaaggagcgagagaaggcgctgcaccagacgcatctattggttctgttggccacccgc
atcaaatggagcacagtgagccgctcgcaattgctgcggggtctgctgctgtctctgacc
gccggcagcgatgtggatttcttcgcagagatgaagcagcagccgctttcctactctttg
gagctgctggttcggtgccttatgaacttcttcttcgctcgaaaaggacgcgactatgag
ctcacagtgctgtttgctgcgttgtgtggagctctccagttgcgttatcgcttgacgtgt
gcgttggacccgttgttggtgcaaaaggggaaggcgttcgagtcgtcgttcaagcagaaa
ccaaccaagcgacgacgggcacggaagatcgcagacacgatactaaagaagaagaagaag
atcggagtgttttggctgtggtgtgaagttttggacgaaaagaccaagagctggatccac
gtggatgttgtgcgtcggcttgttggacggcctcaggaggttgagccgctgcgaggcaag
gcagcgcgcttctcgtatgttatcagcatccaagataacgagttgctggtggacgtaact
tcccgatatacagtgcaatggagcaagagcttagagttgcgtcttgctgattcgtggctg
aagcaagtgatcgagcggttcaatgacgacgcaatgatccaacgtggtgctctcgaggat
gagaagaagtcgctggagacattgaagctcgacgagggcatgcccacgagcgtggaaggg
ttccgaaagcaccacttgtactgcctggagcgccatctcggacagctcgagtgtcttcat
ccacggaaggtggtggggttgttcaacggccagcctgtgtttctgcgggaacatatacag
ccgctgcagtccgccttcaaatggcgtcgtctcggccgtgtagtgaaggagagcgagcgg
gagaagcctgccaagtggaagtcacgaggcagcgaccccagctccaaacccgccggcgag
agcgatggcagtgacggcgaagacggcaaatctggtgctggtggtgcgctcttcggctta
tggcagacgaccgagttcgagcctccgcccatggtcgacggccgcgtccccaagaaccag
tacgggaacatcgagatctggagctcggcccacgttcctcgaggcgcggtccatctgcgt
ctgccccgcatcgataccattgctgagtcgttgggcatcgactttgcgccggcagtggtg
ggtttcgaggtgcgcaacggacgcaccatgcccaaagtggcaggcatcattgtggcacag
agccacgaggccacgctgctggacgcccacgccgagagacagcagcagaccatcgagaag
gcaattgagcacaactgcaagcttgtgctcaagcgctgggcgaagctcaccaagcgcctg
ctgctgcgtcagcggcttgaagacgattacggtgcagtgtaa
DBGET
integrated database retrieval system