Phytophthora sojae: PHYSODRAFT_490560
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Entry
PHYSODRAFT_490560 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_490560
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
90S particles
Other 90S particles
PHYSODRAFT_490560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
Spt6_S1
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Suf
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
TPR_14
UTP6_C
TPR_6
TPR_16
Cwf_Cwc_15
VPg
Motif
Other DBs
NCBI-GeneID:
20656587
NCBI-ProteinID:
XP_009523037
JGI:
Physo3_490560
UniProt:
G4Z6Q4
LinkDB
All DBs
Position
Unknown
AA seq
1892 aa
AA seq
DB search
MAVAAATSFPRGKKPKASGQKVAAPSAGAPGEALFGKRGLAAVAAAAEEQPKKKAKKAAK
AAVPKAGKDEPKAAKAALLSFKTLRKGMLLLGCVRQVTDGQDLMISLPNKLNGTVALAEC
SDDSIFKVGQFVPCVVLATSKTDKRKQIQLSLRTSLLHAELSVASLTKGASLHATVSSVE
DHGAIVNLGIRGVHAFVPRKELAAPVLKGQHLLVSVLSMNAHTNTATVTIDRSTVVKAVT
RGDSFTLKQLVPGMLLNVRVEDVLENGLSVTFLTFFTATVEQNHMSLPCERGWEESFRKG
MKARARIMSIDYIAKQITLSIAPHVVHMQVPDSPYSVGDIIEEATIERIDAGVGMLLSLK
SKTSQDEDVEMEDASEKKESTTNAKWKAFAPGYVHISNVSDKRVDKLEKKYTVGSSIKCR
VLGFSPFDAVVNISCKESALSQTVLRHKDLAPGTKVSGIILSVESWGILMEISEGVRGLV
NPQHMPAFLLNKKANNNGKYKVGKVASARVLHVDLEAKKTFLTMKSGLLASELPVLSSFE
EAKMDLIAHGYITKIAEYGVIVTFYNNVYGLVPMAVLQQAGIENLEEAYVIGQVVKARVT
RCDPSKKRLMLSFDTTSNKSGNAPTAAPETAAELVGKTITNVKITDVEATCFRVQTADGM
EGVLPFVQLTDFPRQTSLVDEIVKGFSAGDMISEPLLVVAQESDGVLTLSKKPLLLEFAS
RSAILPRTFGDVQENAVLIGYVTSVNVAKGVFVKFLNNLVAVAPKGFLKEEFVSEIEEGM
FEIGETVTCSVESVDKAKKQFVVGFKQGNFVQVTNATNKARLAYFQAYLREQAAVRSAAA
AKKASFALGKTEKAEFVGVRPYGAVFALEKDEETVTVLVPSVTEKNNEWDEGDSVKLLLT
DYDFSKNVYYAAADESLVKSGSKRSRKQKQRVKAGGKIEAAKVVAVSPTEKYAVVSFPDA
QNADLLHFGVVELCDFWCPSQTSGQLGIEVGASVECRVVQSTLKSGSNSTPFDDLVLLAL
AEEKLVSKAKKDTRKSASKLPKYSPNDLTLGNTLTGVIAGISENSMEIRVETGKKVGKVR
ATVSIVDVDGIDEKYGHAHPFDKYSVNAAVTGRVIAVTAKGANKLKPVSKENPATFHAIQ
LSLRTEDVAGDEKVTDVQRFVRPDWLEGSAGRALLKEGNSVDGIVSDQGADQLTIKLSSN
VTGTLSCVEVSEDVEVVRAFQDKFPVGKRVKCFVLQVDDEKKTVDLSLIHSSSAQDKAVV
KPGSIINGVISKKKSAIRPPSIMVQLGAHTFGRVCVTELLAKWENNMLELPQFAAGKVVR
CVVLSNNNNHIDLSLRKDALANPKEYAKKTSKPAERGVGDLVPAVVASTSTTGCFVRVDR
HTTARVMLRDLSDDFVKDPQEHFPTGKLVAGRVTKKSDRGLELSLKASVVSEDVSVFKWN
DLKEGLTVKGTVTKVQTYGVFVRIEKSTISGLCHISEVADEKVTQPLDQIFSEGDYVKAK
VLKVDGRRVSFGLKPSYFEGETPAKKPAAKKVAKPVAMEIDLGDDESSSEDEDASGAAPV
EFSWDGFSNALNKKTEAKDDDESSSEDEDDEEEEAAKSSKSKKNRLQSDEWVALREKALA
SSDEVPQSASDYERLLAVSPQSSYLWIQYMAFHISLTEVDLARDVAVRATSAVSFRDEKE
KLNVWVAYMNLEHDFGDDASFLRVFKSALQVNHPKRVYLHLVDLYARADEHEDVKQTLAT
MQKKFRTSKQTWIRSLQYLVGEKLFAEAAETLQRSLKSLSAHKHLPVILKYGQLLYEQGE
LDKARTIFEGILANYPKRMDLWNVYLDKEIKFGDVALVRALFERLLAMDFSAKKMKFLFK
KYMQFEQDQGDDEHVEHVKQLAKDFVASAAAK
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagcggcgacgagtttcccgcgtggcaagaagcccaaggcttcgggccag
aaggtggccgcgccgtccgcgggcgcgccgggcgaggcgctgttcggcaagcgcggactg
gcggcggtggccgcggcggccgaggagcagcccaagaagaaggccaagaaagcggccaag
gcggccgtgcccaaggccggcaaggacgagcccaaggccgccaaggccgccctgctcagc
ttcaagacgctgcgcaagggcatgctgctgctgggctgcgtgcgccaggtcacggacggc
caggacctgatgatcagcctgcccaacaagctcaacggcacggtggcgctggccgagtgc
tcggacgacagcatcttcaaggtgggccagttcgtgccctgcgtggtgctggccacgtcc
aagaccgacaagcgcaagcagatccagctgtcgctgcgcacctcgctgctgcacgcggaa
ctgagcgtggccagcctgaccaagggcgcgtcgctgcacgccacggtctcgtccgtggag
gaccacggcgccatcgtgaacctgggcatccgcggcgtgcacgccttcgtgccccgcaag
gagctcgcggcgcccgtgctcaagggccagcacctgctggtcagcgtgctgtccatgaac
gcgcacaccaacacggccaccgtgaccatcgaccgcagcacggtcgtcaaggccgtcacg
cgcggcgactcgttcacgctcaagcagctcgtgcccggcatgctgctcaacgtccgcgtc
gaggacgtgctggagaacggcctgagcgtcacgttcctcaccttcttcacagccacggtc
gagcagaaccacatgagtctgccctgcgagcgcggctgggaggagtccttccgcaagggc
atgaaggcccgcgcgcgtatcatgagcatcgactacatcgccaagcagatcacgctgtcc
attgccccgcacgtcgtgcacatgcaggtgcccgactcgccctactcggtgggcgacatt
attgaggaggccaccatcgagcgcatcgacgccggcgtgggcatgctgctgtcgctcaag
agcaagaccagccaggacgaggacgtcgagatggaggacgccagcgagaagaaggagtcc
accacgaacgccaagtggaaggccttcgcgcctggatacgtgcacatctcgaacgtgtcg
gacaagcgcgtggacaagctggagaagaagtacacggtgggctcgagcatcaagtgccgc
gtgctcggcttctcgccgttcgacgccgtcgtgaacattagctgcaaggagagcgcgctt
tcgcagaccgtgctgcgccacaaggatctggcacccggcaccaaggtgagcggcataatc
ctgtcggtcgagtcgtggggcattttgatggagatcagcgagggcgtgcgtggcctggtg
aacccgcagcacatgccggccttcctgctgaacaagaaggcgaacaacaacggcaagtac
aaggtgggcaaggtcgcgagcgcgcgtgtgctacacgtcgacctggaggccaagaagacg
ttcttgaccatgaagtcgggcctgcttgcgtcggagctgcccgtcctgagctccttcgag
gaagcgaagatggacctcatcgcgcacggttacatcacgaagattgccgagtacggtgtg
atcgtcactttctacaacaacgtgtacggcctggtgcccatggccgtgctccagcaggct
ggcatcgagaacctggaggaggcttacgtgatcggccaggtggtgaaggcgcgcgtgacg
cgttgtgacccgagcaagaagcgtttgatgctgtcgttcgacacgacgtcgaacaagtct
ggtaatgcgccgactgccgctccggagactgccgcggagcttgtgggaaagactatcacc
aatgtcaagattacggacgtggaggccacgtgcttccgcgtgcagactgcggatggcatg
gagggcgtgctcccgttcgtgcagctgacggacttcccgcgccaaacttcgctggtggat
gaaatcgtcaagggtttcagcgctggggacatgatctcggagcctctgctcgttgtcgct
caggagtccgatggcgtgttgacgctctcgaagaagccgctgctgcttgagtttgcctcg
cgcagtgccattctgccccgtactttcggagacgttcaggagaacgccgttcttattggt
tacgtgacgtctgtgaacgtggccaagggtgtcttcgttaagtttctgaacaaccttgtg
gcggtggcccctaagggcttcttgaaggaggagtttgtctcggagatcgaagagggtatg
ttcgagattggcgagactgtgacgtgctctgttgagagcgtggacaaggcgaagaagcag
tttgttgttggcttcaagcagggcaacttcgtgcaggttaccaacgccaccaacaaggcg
cgccttgcctatttccaggcttaccttcgcgagcaagccgcggtgcgcagtgctgctgct
gcaaagaaggcctcgtttgctctgggcaagacggagaaggctgagttcgtcggcgtccgc
ccgtacggtgctgtcttcgctcttgagaaggacgaggagactgtcacggtgctggtgcct
tcggtgacggagaagaacaacgagtgggacgaaggcgacagcgttaagctgctgctgacg
gactacgacttcagcaagaacgtctactacgctgctgctgatgagtcgctggtgaagagc
ggctcgaagcgctcgcgcaagcagaagcagcgcgtgaaggctggcggaaagatcgaggct
gctaaggtggtggccgtgagccccacggagaagtacgcggtggtgtcgttccctgacgct
cagaacgccgacttgcttcacttcggcgttgttgagctgtgcgacttctggtgcccgtcg
cagaccagcggccaactcggaatcgaggtcggtgcctctgtggagtgccgcgtggtgcag
tctacactcaagagcggctccaactcgacgccgtttgatgaccttgtgctgttggcgctc
gccgaggagaagctggtgtctaaggccaaaaaggatacgcgtaaatcggcgtcgaagctg
cccaagtactcgccgaacgatctcacgcttggcaacacgctgaccggtgtcatcgctggc
atttcggagaactcgatggagatccgagtggagaccggcaagaaggtgggaaaggttcgc
gcgacggtctcgattgtcgatgtcgatggaattgacgagaaatatggccacgcgcacccg
ttcgacaagtactcggtcaacgccgctgttaccggccgtgtaattgctgtcactgcgaag
ggagccaacaagctcaagcccgtcagcaaagagaacccggccacgttccacgccattcaa
ctatcgctgcgcactgaggacgtggctggcgatgagaaggtgactgacgttcagcgattc
gtccgccccgactggctggagggcagcgcgggccgtgctcttctgaaggaaggcaactcg
gtggatggtatcgtctcggaccagggtgcggaccagctgactatcaagctcagcagcaac
gttactggcacgctgagctgcgtggaagtgtcggaggacgtggaggtggtgcgcgcgttc
caggacaagttccctgtgggcaagcgcgtgaagtgcttcgtgctgcaggttgacgatgag
aagaagacggttgacttgtcgctgattcactcgtcgtcggctcaggacaaggccgtggtg
aagcccggaagcatcatcaacggtgtgatctccaaaaagaaatcggcaattcgcccgcct
tccatcatggtgcagctgggtgcccacactttcggacgtgtgtgcgtcaccgagctcctg
gccaagtgggagaacaacatgctggagctgccccagttcgctgccggcaaggtggtgcgc
tgtgtggtgctctcgaacaacaacaaccacatcgacctgtccctgcgtaaggatgccctg
gccaacccgaaggagtacgcgaagaagacgtccaagccggctgagcgtggcgtcggtgac
ttggtgcctgcggtggtggcgtcgacttctacgaccggttgcttcgtgcgcgtggaccgc
cacacgacggcgcgtgtcatgcttcgtgacctaagcgatgacttcgtgaaggacccgcag
gagcactttcctaccggcaagctggtggctggccgtgtgacgaagaagtccgaccgcggc
ctggagctgagcctcaaggcgtctgtcgtctcggaggatgtgtcggtgttcaagtggaac
gacctgaaggagggtctgacggtcaagggcacggtcacgaaggtgcagacgtacggcgtg
ttcgttcgcatcgagaagagcacgatcagtggcctgtgccacatctccgaggttgccgac
gagaaggtcacgcagccgctggaccagatcttttcggagggcgactacgtcaaggccaag
gtgctcaaggtcgacggccgccgcgtgtcgttcggcctgaagccctcgtacttcgaggga
gaaactcctgccaagaagcccgcggccaagaaggtcgccaagcccgtggccatggagatt
gaccttggtgacgacgagtcttcttcggaagacgaggacgcgagcggcgctgcccctgtt
gagttcagctgggacggcttctcgaacgcgctcaacaagaagacggaggccaaggacgac
gacgaatcttcgtctgaagacgaggatgacgaggaggaggaggccgccaagtcgtccaag
tcaaagaagaaccgtctacagagcgacgagtgggtggcgctgcgcgagaaggctcttgcc
agcagcgacgaggtcccgcaaagcgcgagcgactacgagcgcctgctggccgtgtcgccg
cagagctcgtacctgtggatccagtacatggccttccacatctcgttgacggaggtggat
ctggcccgcgatgttgccgtccgtgccacgtcggcggtgtcgttccgtgacgagaaggag
aagctcaacgtgtgggtggcctatatgaacctggagcacgacttcggtgacgacgcgagt
ttcctgcgcgtcttcaagagcgcactgcaggtgaaccacccgaagcgcgtgtacctgcac
ttggtggacctctacgcgcgcgccgacgagcacgaggacgtgaagcagacgctggccacg
atgcagaagaagttccgcaccagcaagcagacgtggatccgctcgctccagtacttggtg
ggcgagaagttgtttgctgaggccgctgagaccctgcagcgaagtctcaagagcctgtcg
gcccacaagcacctgcctgtgatcctcaagtacggccagctcctgtacgagcagggcgag
ctggacaaagcccgcaccatcttcgagggcatcctggccaactacccgaagcgcatggac
ctgtggaatgtgtacctggacaaggagatcaagttcggcgacgtcgcactcgtgcgcgcg
ctgttcgagcgcctgctggccatggacttctcggccaagaagatgaagttcctcttcaag
aagtacatgcagttcgagcaggaccagggcgatgacgagcacgtggagcacgtcaagcag
ttggccaaggacttcgtcgctagcgctgcggccaagtag
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integrated database retrieval system
