Phytophthora sojae: PHYSODRAFT_495301
Help
Entry
PHYSODRAFT_495301 CDS
T03459
Name
(RefSeq) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
psoj
Phytophthora sojae
Pathway
psoj00040
Pentose and glucuronate interconversions
psoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PHYSODRAFT_495301
Enzymes [BR:
psoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PHYSODRAFT_495301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
TSGP1
Motif
Other DBs
NCBI-GeneID:
20657167
NCBI-ProteinID:
XP_009522009
JGI:
Physo3_495301
UniProt:
G4Z2V7
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MFKSFAPFVAAAAFAVAATSAATLPNGSWPSSKGLVQFSEVRTIKAGEVFDGKMQTFERS
NVKCGGQSESGWKTAVFYVEAGGTLKNVIIGKNQMEGVHCDQQDCTIENVWWDDVCEDAL
SVKGGSASSVTKVIGGGARYADDKVIQHNGLGKVIIDGFYGEDVSKLYRSCGTCGPKARE
VSVSNTYVVNPGNAVVTVNKNWGDKATLSNVWVKSSKATVKVCQWSQGNAKGEPSILGHG
PSGTLCKYSTSDVHINQDISKAKTAPAEDPTQGDDDYTAQTPAPKSKKTTAPKVTKAPKT
KKPATNTPSVEDPTQQQTGPSVDDPTQQTAPTTNSTSSIPDGTWPASKGTVRFEKPYVVK
AGEVFDGQMKTYDRSDIKCSGGEGQKDTAVFLVEAGGTLKNVIIGKNQKEGVHCDEHDCT
IENVWWDDVCEDALSIKGGSASSVTTVTNCGARYASDKVVQHNGYGTVKINGFFAQEFGK
LYRSCGTCGNIPRTVTVENVFAIDPLVSVVTVNKNYNDQASFKNIRVKTTNGRNDVKVCQ
WSQGSKTPSNLGDGPSGKLCKYTSSDVHINED
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtccttcgcgccgttcgttgcagctgccgccttcgcggttgcggccacttcc
gccgcgaccctgccgaacggctcgtggccttccagcaagggcctcgtgcagttctcggag
gtgcgcaccatcaaggcgggtgaggtgttcgacggcaagatgcagacgttcgagcgctcc
aacgtcaagtgcggcggccagtccgagagcggctggaagacggccgtgttttacgtcgag
gccggcggcaccctcaagaacgtcatcatcggcaagaaccaaatggagggcgtccactgc
gaccagcaagactgcaccatcgagaacgtgtggtgggacgacgtgtgcgaggacgcgctc
agcgtcaagggcggctcggcctcgagcgtgacgaaggtgatcggcggtggcgcccgctac
gccgacgacaaggtcatccagcacaacggcctgggcaaggtcatcatcgacggcttctac
ggcgaggacgtcagcaagctctaccgttcgtgcggcacttgcggccccaaggcgcgcgag
gtgtccgtgtccaacacgtacgtcgtgaacccgggcaacgccgtggtgacggtcaacaag
aactggggcgacaaggccacgctcagcaacgtctgggtcaagtcgagcaaggccactgtc
aaggtgtgccagtggtcgcagggcaacgccaagggcgagcccagcatactgggccacggc
ccgtccggcacgctgtgcaagtactcgaccagcgacgtccacatcaaccaggacatctcc
aaggcgaagacggctccggctgaggacccgacccaaggcgacgacgactacacggcccag
accccggcccccaagtcgaagaagacgacggcccccaaggtgaccaaggcccccaagacg
aagaagcccgctaccaacacccccagcgtcgaggatcccactcagcagcagaccggcccc
agtgtcgacgaccccactcaacaaaccgcccccaccaccaactcgacctcgtcgatcccg
gacggcacgtggcccgccagcaagggcacagtccggttcgagaagccgtacgtggtcaag
gccggtgaggtgttcgacggccagatgaagacgtacgaccggtcggacatcaagtgttcg
ggcggcgagggccagaaggacacggccgtgttcctcgtggaggccggcggcaccctcaag
aacgtcatcatcggcaagaaccagaaggagggcgtccactgcgacgagcacgactgcacc
atcgagaacgtgtggtgggacgacgtgtgcgaggacgcgctcagcatcaagggcggctcg
gcctcgagcgtgaccaccgtgaccaactgcggcgcgcgctacgcctcggacaaggtggtg
cagcacaacggctacggcaccgtcaagatcaacggcttcttcgcgcaggagttcggcaag
ctctaccgctcgtgcggcacgtgcggcaacatcccgcgcaccgtcacggtggagaacgtg
ttcgccatcgacccgctcgtgagcgtcgtcacggtcaacaagaactacaacgaccaggcc
tcgttcaagaacatccgcgtcaagacgaccaacggcaggaacgacgtcaaggtgtgccag
tggtcgcagggcagcaagacgccgtccaacctgggcgacggcccgtcgggcaagctctgc
aagtacacgtcgagcgacgtccacatcaacgaagactga
DBGET
integrated database retrieval system