Phytophthora sojae: PHYSODRAFT_499334
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Entry
PHYSODRAFT_499334 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
psoj
Phytophthora sojae
Pathway
psoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHYSODRAFT_499334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_499334
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PHYSODRAFT_499334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
TPP_enzyme_N
Motif
Other DBs
NCBI-GeneID:
20657682
NCBI-ProteinID:
XP_009526502
JGI:
Physo3_499334
UniProt:
G4ZEU8
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MVATTPQRQDGRAGNELRPFASEQGALFRADGSARMSHGSSTVLASVYGPGQARNWRAEK
TDKATLDVCFKLEKGITTSKEREYEQIIRETFTPVVLTDSFPRAVISIVVQVIEDNGSIS
FPLFSYYAFAINAVSLALMDAGVPMLSVVTATSKRFLGSPLRVPVQARGS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgacgactccgcagcgccaggacggccgcgccggcaacgagctgcggcccttt
gcgtccgagcagggcgcgctcttccgagccgacgggtctgcgcgtatgtcgcacggcagc
agcacggtgctggcgtccgtgtacggccccggccaggcgcgcaactggcgcgccgagaag
acggacaaggccacgctggacgtgtgcttcaagctggagaagggtatcacgacgtccaag
gagagggagtacgagcagatcatccgcgagaccttcacgcccgtggtgctcacggacagt
ttcccgcgcgccgtcatcagcatcgtcgtgcaagtcatcgaggacaatggctctatatcc
tttccactgttttcttactatgcatttgcgattaacgccgtgagcttggcgctgatggat
gccggagtcccaatgctctcggtcgtcaccgccacttcgaagcggtttcttgggtcacca
ctgcgcgttccagtacaagcgagggggtcctga
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