Phytophthora sojae: PHYSODRAFT_502345
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Entry
PHYSODRAFT_502345 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K03678
exosome complex component RRP45
Organism
psoj
Phytophthora sojae
Pathway
psoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHYSODRAFT_502345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_502345
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PHYSODRAFT_502345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Anoctamin_N
Motif
Other DBs
NCBI-GeneID:
20658091
NCBI-ProteinID:
XP_009527007
JGI:
Physo3_502345
UniProt:
G4ZFL2
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MALRDEHDFLSENERQFLANCLRQPPHVRADGRELLQQRKIRVQFRRSETESQAEVQLGR
TRVIGNVHGEIVPPFPDRPTEGFLHFAVELSPMASPSFEAAASAGRGAASSVAAAELARL
VERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRPEV
AVKEGTAGNGGVTVYSVDEHAAVPLSLHHIPISISFCFLQPAAKIQNNAGNDDDIDADED
GEPIIFMDPTDREERITDARMSFTFNSFRELCAVHKIGGAAISQSTVLRCANVAAARVVE
LTTFLKEEEEKADKEAVQRRRALLRGRAFADVSSTLDEATAKSTVEKVDLGAMTDFSTLH
APIALRDEPTKEETAQQVTSMAELLESLETAADQAEEEPKPAAEGLAMTDAARDEFRQLA
NSETVRDLIHGSKKEQPKPAQPAKKKPVVDSDSDSEEEGGVLQSEFGTAAKPEEPVQAKK
NAKPVKKTPLKKGRKKKVESSSDEDEDMDLSAAIKRK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgggacgagcacgacttcctgagcgagaacgagcgccagttcctggccaac
tgcctgcgccagccgccgcacgtgcgcgccgacggccgcgagctgctgcagcagcgcaag
atccgcgtgcagttccggcgcagcgagaccgagagccaagcggaggtgcagctgggccgc
actcgggtgatcggcaacgtgcatggcgagatcgtgccgcccttcccggaccggccgact
gagggcttcctgcacttcgccgtggagctgtcgcccatggcgtcgcccagcttcgaggcc
gccgcttctgcaggtcgcggcgccgcctcgtccgttgccgccgcggagctggcgcgcctg
gtggagcgcggcgtgcgcgagagtcgcgcgctggacacggaggcgctggctgtggtggct
ggagagaaggtctgggccatcacgtgccacgtgcacgtcgtggaccacggcggcaacctc
gtggacgcggcctcgctggctgccatcgcagcgctcatgcactaccgccgcccggaggtt
gcagtgaaggagggcacggcaggcaacggaggagtcaccgtgtacagcgtggacgagcac
gcggctgtcccgctcagtctccaccacatcccgatctccatctcgttctgcttcctgcag
ccagctgcgaaaatacagaacaatgccggcaacgacgacgacattgacgctgacgaggat
ggcgagcccattatcttcatggaccctacggaccgcgaggagcggatcacggacgcgcgc
atgagcttcacgttcaactcgttccgcgagctgtgcgcagtgcacaagattggcggtgcc
gcgatttcccagtcgactgtactgaggtgcgcgaatgtggcagcagcgcgtgttgttgaa
ctgacgacttttctcaaggaggaggaagagaaggctgacaaggaagccgtgcagcgccgt
cgcgcattgctacgtggccgcgcattcgcggatgtatcgtcgacgctggatgaagcgacc
gctaaaagcacggtggagaaggtcgatttgggtgcaatgacggatttctcgactctgcat
gctcccattgcgctgcgcgacgaaccgacgaaggaggagactgcccagcaggtgacgtcg
atggccgagcttctggagtccctcgagactgctgctgatcaggccgaggaggagccaaag
ccagctgcagagggtcttgcgatgactgatgcggctcgggacgaattccgtcaattggcc
aacagcgagactgtgcgtgacttgatccacggcagcaagaaggagcagccgaagcctgcc
caacccgccaagaagaaacccgtggtggacagcgatagcgacagcgaggaggagggagga
gtacttcagagcgagtttggcacggcagcaaaaccggaggaacccgtccaggcaaagaag
aacgcaaagccagtgaagaagaccccactcaagaagggcaggaaaaagaaggtggagtct
agctcagatgaagacgaggacatggatctcagcgccgccatcaagcgcaagtaa
DBGET
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