Phytophthora sojae: PHYSODRAFT_503331
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Entry
PHYSODRAFT_503331 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K19676
intraflagellar transport protein 172
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psoj03037
]
PHYSODRAFT_503331
Cilium and associated proteins [BR:
psoj03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
PHYSODRAFT_503331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ELP1
TPR_IF140-IFT172
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
TPR_IFT80_172
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_WDR19_1st
WDR55
Beta-prop_HPS5
Beta-prop_RIG_2nd
Clathrin
RMC1_N
PEP5_VPS11_N
Beta-prop_IFT80_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_ELP1_2nd
TackOD1
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
20658212
NCBI-ProteinID:
XP_009526416
JGI:
Physo3_503331
UniProt:
G4ZDC3
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MQLRHLTSLLQATEGMCKVTAIAFSPNNRRLAVVTVDRVVHLFDAQTGERKDKFSTKPAD
KGDKNYIVRALEFSPDSTKLAVAQSDNIVFVYKIGLEFGDKKSICNKFAQPSSVTALTWP
STHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSRVCSNPEGTAILSAHYDGAIYRF
IFDDVTGGPTHAKLVVHSCVPYALSWGESIVAAGNDRRVSFYDKDGAQLRTFDYSADEKC
GEFTCSVFNPTGESVVVGNFDSFYTFNFQHKTESWELVGSKSIPNLYSVTALAWKHDGSR
LAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRLATGARVVVRSAFGCEITKL
NVFQDRFLVGNTTNTLIVGDLDTSRISEVQWQSTGAEKYMLDNESVCIVYQAGELSLIEY
GQNELLGSVRTEHLNTHLLSVRINERPPLPMPQDGGDPMPPQENKKIAYLLDLQTICITD
LHARAASTVNHDSRVDWLELNSRGNLLLFRDKRRQLHLFDLDTQKRSTLLNYCNYVQWVP
ESDVVVAQNRNNLSVWYNIRSPDKATIYQIKGDVEQIERGNGRTEVIVDEGMNTASYQLD
ESLIAFGAAVDDGQLVNAMSILEPLELTPETEAMWSQLSQEALAQNDHRIAERCAAALGD
VARSRYLRKLNKLDWQEKDRLNGLAHWKVRAKLAVLKNDYRSAEHLLLAQGQVDEAIEMY
QHLHKWEDAIRVAEAKNHAECEQMKRSYYDYLVESRQEEKAAAVKVKDGDYASAVSLYLK
GGLPAKAAQLLNQRNLGRDHKQLLETVADALYSAGMFEKAGDQFEKMEQESRALAAFIKA
NAFRKAVELSRKHFPDKVLRLEEAWGDYLVSQKQMDMAINHYIEGNVPTKAVEAALNSRQ
WAKASQLVENLEDDVSLPYYRRLARHYQDAGNLEQAERCFIKADAARDAVEMYTRANKWD
AAYQVALNHLDKYETERLYVEQAHRMERAGKLKEAEKLFLTVNEPDLAINMYKNHKNYEQ
MIRLVTKYRKDLLKDTNLYLAQQLEHEGNYKEAEHHFAEAGEWQAAVNMYRSNDMWDEAI
RVAKFHGGINASKRVAYAWAMDLGGEQGAKLLTRLGLIEPAIDYAIESGAFEHAFELARN
CATKKLPEVHLKHALFLEDEERFKEAEEEFIKAGKPREALDMYVHQQDWQNAMRVAESAD
PASVADVFIAQARLWIERKEHQRAEGFFLSAGKPELALAAYLEAAMWADAVRIAKRHLPH
KLMEVNMAHQRAIFSGGPKKKEELMEACEMWVASQQYVQAIDAYLSISVDQISDLGELEE
LWAKAIELCAKHDPSRYKSIVEEVASRLLGMSRFDSAAEHFQSIDKMNEALDCYLRVNNW
VAAQKLCEQHAPELLPRLERAQQASAFGSAAHQPAEAKMAGSSYTPSADAKVQYASEKKE
SKLSAGGEGDDSGRGASALDAWMQRGEWDKVLSSAAKHGPGSLAKYLVLRCSRLCEHDEM
GTAIKTIADYGIPLDSDALDMTERLVQKTLGCGHGIEENPEHQAALPELVKCLRKLVKDL
RGNGKEFPSSRVQKMEQWLLVAHFFAIKHQAANVGLDDLVAKISMSLLRFVAVLPADKMF
YLAGAAARKKKWLSAAFVYFNRYLDLCEAIDDGDASNLDNTDFIGTDIPSPLDFALPETH
FVAEESAREEIRDWVLTISMDQQVAEKLPERACLNCKASIYEAALQCPECKTASESCIIT
GFPVAAKTTVHCATCKVIADRETWNKWVKQFGNCPWCSAPQKMSY
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgcgccacttgacgtcgctgctgcaggcgacggagggcatgtgcaaggtcacg
gccatcgcgttctcgcctaataaccggcgactcgctgtcgttaccgtggaccgtgttgtg
cacctgttcgacgcgcagactggggagcgcaaggacaagttctcgaccaagccggcggac
aagggcgacaagaactacatcgttcgtgcgcttgagttctcgccggactcgaccaagctc
gcggtggcccagagcgacaacatcgtcttcgtctacaagattggtctcgagttcggagac
aagaagagcatctgcaacaagttcgctcagcccagctccgtaacggcgctcacgtggcca
agcacccacccgaacgaaatcgtcttcggtctggccgatggcaaggtgaagatcgggcaa
ttgcgcagtaacaagccggctacgctgtatgcttctgggtcgtacgtgtcccgagtgtgc
agcaaccccgagggaactgcaatcctttcggcacactacgacggcgctatttaccgtttc
atcttcgacgatgtcactggaggaccgacgcacgcgaagcttgtggtgcactcctgtgtc
ccttatgcactttcgtggggagaaagtatcgtagctgcgggcaatgaccgtcgcgtgtcg
ttctacgacaaggacggagctcagcttcgcacgtttgactactcggcggatgaaaagtgc
ggtgagttcacctgcagtgtgttcaatccgacgggcgaatctgtggtcgtgggcaacttt
gactcgttctacacgtttaacttccagcacaaaacggaatcctgggagcttgtgggatcg
aagagtattcccaacctctactcggtcactgcgctcgcatggaaacatgacgggagtcgt
ttagctgtgggctccgtctgtggcgcgttggatctgtatgatgcctgcgttcgtcgctat
cgctacaaaggcaaattcgagtttacctacgtatctctaagccaggtgatcgtcaagcga
ctcgctacgggggctcgcgtcgtggtgcgttccgcgttcggatgtgagatcacgaagctt
aacgtgttccaagatcgatttttggtcggtaatacgacaaacacgcttattgtcggagac
ctcgacacttcgcgcattagcgaggtgcaatggcagtcgactggagccgagaaatacatg
ctggacaacgagagcgtctgcatcgtgtaccaagcgggtgagctgtccctcatcgagtat
ggacagaatgagctcttagggtccgtgaggacggagcacctgaacacgcacttgcttagt
gtgcggattaacgagcggcctccgctcccaatgccacaagatgggggtgacccgatgcca
ccccaggagaacaagaaaattgcgtacttgctggatctgcagacgatctgcatcaccgac
cttcatgcccgtgctgcctcgacggtcaaccacgactcccgtgtagattggctcgagcta
aactcacgtggaaacttgctcctgttccgtgataagcgacgccagcttcacctcttcgat
ctcgacacccagaagcgtagcacactgcttaactactgcaactacgtgcagtgggtgcct
gaatcggacgtggtcgtcgcgcagaatcgtaataacctgtctgtctggtacaatattcgc
tcgcctgataaagccaccatttaccagatcaagggcgatgtcgagcagattgagcgtggc
aatggacgcaccgaagtgatcgtggatgaaggcatgaatactgcgtcataccagcttgat
gagtcactcattgcatttggagctgcggtggacgatggacaactcgtcaatgcgatgtcc
atcctagagcccctagagctcactcctgagaccgaggcgatgtggagtcaattgagtcag
gaagcgttggcgcagaatgaccatcgcatcgctgagcgctgcgccgctgctctaggagat
gttgcgcgttcacgataccttcgcaagctcaacaagctcgactggcaggagaaggaccgc
ctcaatgggctcgctcactggaaagtgcgggcaaagcttgctgtacttaagaatgactac
cgcagcgcggagcacttgctgctagctcagggccaagtggacgaggccatcgagatgtat
cagcacttgcacaagtgggaagatgccattcgagtggctgaagcaaagaaccacgcggag
tgtgagcagatgaagaggagctactacgattacctcgtcgagtctcgacaggaagaaaag
gctgcagcagtcaaggtcaaggacggcgactacgcgagtgcagtgagtctgtacctgaag
ggtggtctacctgcaaaggctgcacagttgttaaatcagcgaaaccttggtcgtgaccac
aagcaactcctggagaccgtggccgatgcgctgtactcggcgggcatgttcgagaaggct
ggcgaccagtttgagaagatggagcaggagagccgagcgctggctgcgttcatcaaggct
aacgccttccgcaaggctgttgagctttcgcgaaagcacttcccggacaaggttctgcgt
cttgaggaagcctggggtgactaccttgtatcccagaagcaaatggacatggctatcaac
cactacatcgagggtaacgtacctacgaaggccgttgaggccgcgttaaactcgcggcag
tgggctaaggccagccagctcgttgagaatttggaggacgacgtctcactgccgtactat
cggcgactcgctcgccactaccaagatgcaggcaatctcgagcaggccgaacgctgcttc
atcaaagctgacgctgctcgcgatgctgtcgaaatgtacactcgtgcgaacaaatgggac
gcagcgtaccaagtcgcactcaaccacttggacaagtacgagaccgaacggctttacgtg
gagcaggcgcaccggatggagcgtgctggcaagctcaaggaggcggagaagctcttcctg
accgtgaatgagccggatctagcgatcaacatgtacaagaaccacaagaactacgagcaa
atgattcgccttgtgaccaagtatcgcaaggatctactcaaggatacgaacctgtacctg
gcccagcagcttgagcacgaaggtaactacaaggaggctgagcaccactttgctgaggct
ggcgagtggcaggccgcagtcaacatgtaccggtccaacgacatgtgggatgaggccatc
cgtgttgccaagtttcacggcggcatcaatgcttccaagcgcgtggcttacgcttgggca
atggacctgggcggtgaacagggcgctaaactgctaacgcgtcttgggctcattgaaccg
gcaatcgactatgcgattgagagtggcgccttcgaacatgcctttgaacttgcacgcaat
tgtgctaccaagaagctgccggaggtgcacctcaagcacgcgctgttcttggaggatgaa
gaacgattcaaggaggcagaagaggagtttatcaaggcaggtaagcctcgtgaagctctg
gacatgtacgtgcaccaacaagactggcaaaatgccatgcgcgtcgcagagagtgccgac
ccagcgtctgtggcggatgtcttcattgcccaagcgcgactctggattgaacgcaaggaa
caccaacgtgctgaagggttcttcctcagcgcgggcaaacccgagcttgctcttgctgcg
tatttggaagcagcaatgtgggctgatgccgtgcgaattgccaagcgccaccttcctcac
aagctcatggaggtgaacatggctcaccagcgcgctatcttttctggtggaccgaagaag
aaagaggagcttatggaggcttgcgagatgtgggtggcttctcagcagtatgtgcaggca
attgacgcgtatctgtcgatctccgtggaccagatcagcgaccttggtgagctggaagag
ctgtgggcgaaggccattgagttgtgtgccaagcacgacccgagccgatacaagtcgatc
gtggaggaggtggcgtcacgcctactaggcatgtctcgcttcgattccgcggctgagcat
ttccagtcgatcgacaagatgaacgaagcgctcgactgctacctgcgcgtgaataactgg
gtcgcagcgcaaaagctttgcgagcagcatgcacctgagttgctgcctcgacttgagcga
gcacagcaagcgagtgccttcgggtctgctgctcaccaaccagcagaggcgaaaatggca
ggcagctcgtacactccttcggctgatgccaaggtgcagtatgcctccgagaagaaggag
tcgaagctcagtgctggaggtgaaggcgacgactctggacgcggagcaagcgcactagac
gcgtggatgcagcgcggtgaatgggacaaagttctgtcttcagccgctaagcacgggccc
ggatcgctggccaagtacttggtcctgcgctgctcgcgcctgtgtgagcacgacgagatg
ggcaccgccatcaagaccattgccgactatggcattccgctcgactcggacgccctggac
atgacagagcgactggtgcaaaagacactcggatgcggtcacgggatcgaggagaaccct
gagcaccaggcagcactgccagaactggtcaagtgcctacgcaagctcgtgaaggatctg
cgtggcaacggcaaggagttcccgagctccagagtgcagaagatggagcagtggctactg
gtggcgcacttcttcgctatcaagcaccaagcagcgaacgtaggactagacgacctggtt
gcgaagatcagtatgtccctgctgcggttcgtagccgtcctgcccgccgataagatgttt
tatctggctggggccgccgcgcggaagaagaagtggctcagcgccgccttcgtgtacttt
aaccgctatctcgatctgtgcgaggccatcgacgacggcgacgccagcaacctggacaac
accgacttcatcggcaccgacatcccgtcgcctctggactttgcgctgcccgagacgcac
ttcgtcgccgaagagagcgcgcgcgaggagatccgcgactgggtgctgacgatctcgatg
gaccagcaggtggccgagaagctgcccgagcgcgcgtgcctgaactgcaaagccagcatc
tacgaggcggcgctgcagtgccccgaatgcaagacggcgtcggaatcgtgcatcatcacg
ggctttcccgtggccgccaagacgacggtccactgcgccacgtgcaaggtcatcgccgac
cgcgagacgtggaacaagtgggtcaagcagttcggcaactgcccgtggtgctcggccccg
cagaagatgagctactga
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integrated database retrieval system