Phytophthora sojae: PHYSODRAFT_505395
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Entry
PHYSODRAFT_505395 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
psoj
Phytophthora sojae
Pathway
psoj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHYSODRAFT_505395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_505395
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PHYSODRAFT_505395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
WD40
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_EML
WDR90_beta-prop_4th
DSE1_N
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_ACSF4
Beta-prop_Aladin
EIF3I
Beta-prop_NWD2_C
Beta-prop_CAF1B_HIR1
Beta-prop_NOL10_N
PQQ_2
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
TFIIIC_delta
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
20658484
NCBI-ProteinID:
XP_009529428
JGI:
Physo3_505395
UniProt:
G4ZMP5
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MQLFADSQTHFAAVSEDGRLKLWDVAGGALQQELKERDHLSYRYTCLAWTQANASTSSSK
KSKKRSGASDLGLLALGTSNGSVVVWDLATGEVKHTLQADASSGAVQALAFNPQGSLLYS
SSSDKHVLEWSVSSGSVERKFRVGSGGASALAVSADGEILAAGGSALRTFDLASGKKSRK
LVSGLSSAVTQLRFAAVEDGIEASRFLFAATAGARFVNMYDLQLAEHDAPALTFSLPSSA
DGLFARASVGEVVAKKKSKKSKKNKKENAEEAKPVVDLLVGATASAGAMFLWTHKYQQMK
DASELALASKPLSPTLSTEASAGILLAELSTQEDQKTEVLVARGSLVKPVFEKVSPMEEN
APGQWKTELEFAEISDALLLKAERAEAATKNGSKRQKVEDATAEDEKTHVPTLTERRALA
NSMTVVDETTSFEELDGEADEEENELTLAERVEALRERVESDVTAALNRAEREAETPEDK
ARSGKPDASSLASVLEQALQARDNALLEYCLRTRDAKTVVRTVARVSASRVLGLLEVIVR
KLERSPNRFARLCPWLRAVLLHHTAYLVAQPDLVPSLSALYQLLETRLQVHEQMQKLAGR
LTLVLGQIHVNTAANNDQEDDETQAAVVYHEGEEEVREEAADSSSHEEEEEDEDEDDDVE
TEDE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcttcgccgactcgcagacgcacttcgcggccgtgtccgaggacggccgcctc
aagctctgggacgtggccggcggcgcgctgcagcaggagctcaaggagcgcgaccacctc
agctaccgttacacgtgcctggcctggacgcaggccaatgcctccaccagcagcagcaag
aagagcaagaagcgcagcggcgccagcgacctgggactgctggcgctcggcaccagcaat
ggctcggtcgtggtctgggacctggccaccggagaggtgaagcacacgctgcaggcggac
gccagcagcggcgccgtgcaggcgctggccttcaacccgcagggcagcctgctgtactcg
agctcgagcgacaagcacgtgctggagtggagcgtgagcagcggcagcgtggagcgtaag
ttccgcgtgggctcgggcggtgcgtcggcgctcgccgtgtcggcggacggcgagatcctg
gcggccggcggctcggcgctgcgcacgttcgacctggcctcgggcaagaagagcaggaag
ctggtctcgggcctctcgtcggcggtgacgcagctgcgtttcgccgcggtggaggacggt
attgaggcctcgcgtttcctgttcgcggccacggccggcgcgcgctttgtcaacatgtac
gacctgcagctcgcggagcacgacgcgcccgcgctcaccttcagcctgcccagcagcgcg
gacggcctgttcgcgcgcgcctcggtgggcgaggtggtggccaagaagaagagcaagaag
agcaagaagaacaagaaggagaacgcagaggaggccaaacccgttgtggacctgctggtc
ggcgccacggcgtctgcgggcgctatgttcctctggacgcacaagtaccagcagatgaag
gatgcgtcggagctggcgctggcgtctaagccgctctcgcccacgctgtcgactgaggct
agcgccggcattctactcgccgagcttagcacacaggaggaccagaagaccgaggtgctg
gtggctcgcggctcgctggtgaagcccgtgttcgagaaggtgtcccctatggaggagaac
gctcctggtcagtggaagaccgagcttgagtttgcggagatcagtgacgctctgctgctc
aaggcggagcgtgccgaggctgctaccaagaacggcagcaagcgacagaaggtggaggat
gccactgccgaagatgaaaagacgcacgtgccgacgctgactgagcgtcgcgcgctggcg
aactccatgacagtcgtggatgaaactaccagcttcgaggagctggacggagaggcggac
gaggaggagaacgagctcaccttggcagagcgtgtggaggctctgcgtgagcgtgtggag
agtgacgtgaccgccgctcttaaccgcgccgagcgcgaggctgagacgcctgaggacaag
gctcgcagcggcaagcctgatgcgtcgtcgctggccagtgtgctggagcaggctctgcag
gcgcgcgacaacgctcttctcgagtactgcctgcgtacgcgcgacgctaagactgtggtt
cgtactgtggctcgcgtgtcagcctcccgtgtgctgggcctgctggaggtgatcgtccgc
aagcttgagcgctcgcctaaccgttttgcgcgtctgtgcccgtggctgcgcgctgtcctg
ctgcaccacacggcgtacctggtggcacagcctgacctcgtgcccagtctgtcggctctg
taccagctcctggagacaaggttgcaggtgcacgagcagatgcagaagctcgccggccgc
ctgaccctcgtgctgggccagatccacgtcaacacggccgctaacaacgaccaggaggat
gacgagacccaggccgctgttgtctaccacgaaggcgaggaggaggtgcgcgaagaggcg
gccgacagtagcagccacgaggaggaggaggaagacgaagacgaggacgacgacgtagag
actgaggacgaatga
DBGET
integrated database retrieval system