KEGG   Phytophthora sojae: PHYSODRAFT_508027
Entry
PHYSODRAFT_508027 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
psoj  Phytophthora sojae
Pathway
psoj03022  Basal transcription factors
psoj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PHYSODRAFT_508027
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHYSODRAFT_508027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoj03021]
    PHYSODRAFT_508027
   03400 DNA repair and recombination proteins [BR:psoj03400]
    PHYSODRAFT_508027
Transcription machinery [BR:psoj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PHYSODRAFT_508027
DNA repair and recombination proteins [BR:psoj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PHYSODRAFT_508027
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 20658817
NCBI-ProteinID: XP_009529831
JGI: Physo3_508027
UniProt: G4ZNE6
LinkDB
Position
Unknown
AA seq 298 aa
MASTNAQADGAASSDTANEGLLVLVIDTNPVHWFAQGGSAADRAGLQQLISSTLVFVNSY
LLLHRSNRIVIIAAHAGKSAMLYPDPEQDDTTGSAEQAARVNAGVMQRLQQLSDAPLDPA
KPNRTAIAASLSRALCFINRAINEEPDLRPRILVVQKSPDVSEHYIAIMNGIFSAQKKSV
AVDACILANEHSSFMQQAAYLTGGIYYKPNDHSGLLQYLISIYLPDPSMRKLLKLPSQDS
VDFRAMCFCHREVISTAYVCPVCLSLFCEFRPICSTCGIRSHIQPKKNGLLKKRPRVA
NT seq 897 nt   +upstreamnt  +downstreamnt
atggccagcaccaacgcgcaggccgacggggctgccagcagcgacaccgcaaacgaaggg
ctgctggtgctggtgatcgacaccaatccggtgcactggttcgcgcagggcggcagcgcg
gcggaccgcgcggggctgcagcagctcatctccagcacgctcgtgttcgtgaactcgtac
ctgctgctgcaccgcagcaaccgcatcgtgatcatcgcagcccatgctggcaagagcgcg
atgctgtacccagacccagagcaggacgacacgactgggagcgccgaacaggctgccagg
gtgaacgctggcgtcatgcagcggctgcagcagctgagcgacgctccgctcgacccggcc
aagcccaaccgaacggccattgccgcgtcactgtcgcgtgctctttgcttcatcaaccgc
gccatcaacgaggagccggatctgcgaccgcggatcttggtcgtccagaagtctccggac
gtgtcggagcactacatcgccatcatgaacggcatcttctcggcccagaagaagagcgtt
gcggtcgacgcctgcatccttgcaaacgagcactcgtcgttcatgcagcaagcagcgtat
cttacgggcggcatctactacaagcccaacgaccacagcggcctgctgcagtatctcatc
tcgatctacctgccagacccgtccatgcgcaagctgctgaagcttccgtcacaggactcg
gtggacttccgcgcaatgtgcttctgccaccgagaggtcatctccacggcgtacgtgtgc
cccgtgtgcctgtcgctgttttgcgagttccgacccatctgctccacgtgcggcatccgc
agccacatccagcccaagaagaacggcttgctgaagaagcgcccgcgcgttgcctaa

DBGET integrated database retrieval system