Phytophthora sojae: PHYSODRAFT_512336
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Entry
PHYSODRAFT_512336 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
psoj
Phytophthora sojae
Pathway
psoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHYSODRAFT_512336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_512336
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PHYSODRAFT_512336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF1797
Motif
Other DBs
NCBI-GeneID:
20659347
NCBI-ProteinID:
XP_009531562
JGI:
Physo3_512336
UniProt:
G4ZRI0
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MQNCYYPLPAQPKLPVPADDDAPMERLDKTRGSSDEMRRPFMQLGAVSGAAGSAYVEMGR
TRVVCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKLTRRERGQDPDEMELSAIVEEA
LAPAVMLHKLPKCIVSVFVTVLEDEGGVFAAAINCASLALADAAVEMYDVVTASSAGIVN
GSVVLDPSREEEQRGDGKLALAYMPSMGRVTYMLQAGQIHHTQLQEAVDLCTDACTGVMR
TLLTASLVKALS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactgctactacccgctgcctgcgcagcccaagctgcccgtcccggcggacgac
gatgcgcccatggagcggctggacaagacgcgcggcagctccgacgagatgcgccgcccc
ttcatgcagcttggggctgtgagcggcgctgccggctcggcgtacgtggagatgggacgt
acgcgcgtggtgtgcgcggtctacggcccgcggacggacacgcgcgcgcgccgcgagttc
agcaaggacgggcagttggtgtgcgacgtcaagtacgcgccgttcgccgacaagctgacg
cgccgcgagcgcggccaggacccggacgagatggagctgtcggccattgtggaggaggcg
ctggcccccgctgtgatgctgcacaagctgcccaagtgcatcgtttcggtgttcgtgacg
gtgctggaggacgaaggaggcgtgttcgctgcggccatcaactgcgcgtccttggcgctt
gcggacgctgctgtggagatgtacgacgtcgtcacggcgtccagcgcgggtattgtgaac
ggctcggtagtgctggacccgagtagagaggaggagcagcgcggcgacgggaagctggcg
ctggcgtacatgccgtcgatggggcgggtcacatacatgctgcaggctggccagatccac
cacacgcagctgcaggaggccgtggatctctgcacggacgcgtgcacaggagttatgcgg
acgctgctcactgcgtcgctcgtaaaggctctgtcttaa
DBGET
integrated database retrieval system
