Phytophthora sojae: PHYSODRAFT_516964
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Entry
PHYSODRAFT_516964 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHYSODRAFT_516964
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psoj01001
]
PHYSODRAFT_516964
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_516964
Enzymes [BR:
psoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
PHYSODRAFT_516964
Protein kinases [BR:
psoj01001
]
Serine/threonine kinases: Other
PIKK family [OT]
PHYSODRAFT_516964
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
PHYSODRAFT_516964
mRNA cycle factors
Common to processing body (P body) and stress granule
PHYSODRAFT_516964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
SMG1
HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
20659859
NCBI-ProteinID:
XP_009531923
JGI:
Physo3_516964
UniProt:
G4ZW10
LinkDB
All DBs
Position
Unknown
AA seq
2379 aa
AA seq
DB search
MRHDAAAVAAADAHDAAAAAFNPLVALQSLLAADVASAKQRMRAAQQLQSYFARLSHTPG
LLLSYEPYLPLLTETLGAPQAAKGASAQELQTAVLALLLALSGHNPAGFSDWMARNTQLG
NEPWLVQWSYALLLQTEKTVPRREEGDNDGELDKLDETSPQFKEFDRAFARVLHMWRTLL
DHTADVALVDQLVKYLQVLLVQQQEQGGDKWRTMMLKKLQTHFVDIADVLIGWMMSTGPH
GSLRYVEELGFFEILTLLHHFGRLWADNSVFSLQLLSSFADEIVNLCDSWDDHQEGDDDR
LSTLLTCFMMVAQCVPDLALPTEESANSSFVRVLHSVASCPKPEYSLFCLAHCSEYMVTM
SSSRHSNFPPLSVAAVSFLLYHCAVQAQMHDSEVDKLATVMKNACTLASANFSRVERTPP
VQAAAVRILEGDLPTRIVKKGGQPKRVKVMECLFQVRCAKGLTRIAQLCLHLLRLGGVGA
LKTLGTRAFQRLNSRHKGKRNSYFVFAATCFIVASRNSEMLFASRDDVTHAVGVLELVTA
KLEKQSHRHRQHRLTPRQLCLVLKMASTFVSAVSRFFVGRHDVAEAVKGVAHRLMECAVH
MLPSEAVLVRDHRLTTEVLKVIDTVLSQTDSAVVSPHKVYAYVLEKVNKVARCSNVKVQE
GCFEVLKTLSSRAEASVFVGDVFKTLLDFVLDFDGAVQSGLVLEVLSGIARPALLYQQKE
SVPCVVSQPLHSSFVGADFENLMSLFESRERDGSEWNGACRQIMDRIEPDTVAISKSDVL
LGAVRQAAAWCVQNRLRTHFGGPAQTFSSIEQLVQEYSNGGQSLAETAEPHQLTKWLMLE
FITALEMSITRAIYATEIDQSNPDAEEYKAVLFFRTNKVVCDDWLNRIRPYLVELSRNGT
SYEQCRYHSHAMVTTCYNKLSRTMASFATHGFSDKGYNELKQAEKDMDVALFFLCRCHCD
AKDVDTIIGFQKWGESVSAALTSWYQLNKEKLGITEELCDFSFFRWLNAVRYEAEMRYED
AAAEYEALLLPVLSARSEPLSLGGISAAGIFESPTTYLRMSSQALLGCFKQCAKCYASLR
EWSKLRIFVSQFVELAQSLVNHDRPIEDIQAIFDCSDIVADRFQNDLIPLALQPSPWNGY
AGDKIGKKAEETLLRILGVSTRSQFPLAPFHKTCEMQLNLNPELYDSVVWSQPFCSAGNA
GGADTESLYLTTVARLARKQHNFGFARSILRDAAALSGVGRTASMAVSYEKAKLLETVGM
EDEARRLLENQCETNLAAIVAKPGIFEQEHPALRALLHLSTTFAKADSAELLSPTTSRFL
DDTVTSFRNEKLANLSDINLLSDSPDTAAHRCLEAAISISPRSAKAWIRYSHWCYNRGKR
EIAEIAEQNGYIHLAPSDELQMNSLLDEIGVVEPDRDFIIRAFCHFLDNGELVSQKPDEF
HQLCIDRAPATHDSDAVDRLIQLQQACHSKVLQYFTLAARGYGNYFAVMFGDSDCKAPRQ
ETTMVALRLLSLLTTYGLEKDIVSALEDVFANGPVAPWSYVVPQLIARAHHPVAAVSSLV
CLILKRLARHSPHAIVYPAVVDSMEPQVTFSALQEEKGAASNSFAAVLNELQQVSAGQVE
GVRLLISELRRISILWDEAWISTLMKLSTDVDRRTATLEKEASRVDRNASLSTKEKGELA
QRKLVAIMKPILVSVERLWSETCGRIAEQHAVSPHERRFLKEYGSSIEKAMEIFRDCCSS
ELRSGPASGISSPKELWQPFAEILKALLNSTGRRDQLPLHEISPSLASTSRQLALTNMPG
ALSGKDVGQMEPITIHRVDSSVTILRTKTKPKSLELIGSDGKIYKYLLKAREDLRLDERI
MQFLRVTNEFLRADNAAASRDLSAQSYSVIPLSRNAGLIQMVPDVVPLFQVYTSRNEQQT
SPTGRVPQDSAASASLAQQQPPPPTAQFYAKLKQHGISNVVPNHRAQWPVPVLKQVYQEL
VTQRPRNVLQLEILARSEDLRESWVKSMRLSKSVAVMSVLGYIVGLGDRHLDNILLCVKS
GDIVHIDHNICFDKGRRLKVPEVVPFRLTPMLQDALGFTGVEGRFRVAFETTLRVVRSDD
VREALLTLFEAFVYSPLVDWIADDKRQGRSGDLKARLEVNVNLSLFLSRAEERRQDTVSF
GRQYEQLADVFSRIFKGAKVSFVRLLEQREQMRSLEAEEQELLKAVTSSETELMASQATL
QAKLAEVQQISTQAEEVVGKLSVFAKECWGRHQQIEVWRQKSVNFAETGPEARLHAVVMA
AESASFQKVHATICNVLERSRFAGQQTELLAALESRSRSVDTDVVRLRVEIERLAACLIP
YLSAYSHWRKELDAYLDTELKVAGKDVYFTWWSRCTQCL
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacgacgcagccgcagtagccgccgctgacgcccacgacgccgccgccgccgcc
ttcaacccgctggtggcgctgcagtcgctgctggcggccgacgtggccagcgccaagcag
cgcatgcgggcggcgcagcagctgcagagctacttcgcgcggctgagccacacgcccggc
ctgctgctctcgtacgagccgtacctgccgctgctgacggagacgctgggcgcgccccag
gccgccaagggcgcgagcgcgcaggagctgcagaccgccgtgctggccttgctgctggcg
ctgtcgggccacaacccggcgggcttcagcgactggatggccaggaacacgcagctgggc
aacgagccgtggctcgtgcagtggagctacgcgctgctgctgcagacggagaaaacggtg
ccaagacgagaggagggagacaatgatggagagctggacaagttggatgagacctcgccg
cagttcaaggagttcgacagagcctttgctagggtcttgcacatgtggaggacgctgctg
gaccatacagctgacgtggctcttgtggaccagctcgtcaagtacttgcaggtgctgctg
gtgcagcagcaggaacagggaggagacaagtggaggacgatgatgctcaagaagctgcag
acgcactttgtggatatcgccgacgtgttgattggatggatgatgagcacgggaccgcac
ggatcgctgcggtatgtcgaggagcttggtttttttgagatcctcacgctcttgcatcat
tttggccgcttgtgggccgacaacagcgtgtttagtcttcagctgctgagttcgttcgcg
gatgaaattgtcaatttgtgcgattcgtgggatgatcaccaagagggcgatgacgatcgc
ctcagtaccctgttaacttgttttatgatggtagctcagtgcgttccagatttggcttta
cccacggaagaaagcgccaatagctcattcgtaagagtgctccacagtgtagcatcttgt
ccgaagccggagtattcccttttctgcctcgcgcattgctccgagtatatggtaacgatg
tctagctctaggcatagcaacttccctcccctttcggtggcagctgtgagttttttactg
taccattgtgctgttcaagctcaaatgcatgacagtgaggtggacaaactcgcaacggtt
atgaaaaatgcctgcacactagcaagtgcgaatttttcccgggtagaacgcactccacct
gttcaggctgccgctgtaagaatacttgaaggtgatttaccaacccgaatcgtgaaaaag
ggtggacagccaaagcgcgtgaaagttatggaatgcctgttccaagtacgatgcgctaaa
ggcctcacgcgaatcgcgcagctgtgtctacatttgctgcgactgggaggagttggcgct
ttaaagaccctcgggactcgagcatttcagcgtctaaacagccggcataaagggaagaga
aatagctatttcgtgtttgcggctacatgcttcatcgtagcttctcggaacagcgagatg
ctgttcgcatctcgtgacgatgtgacccacgcggttggagttctcgaattggttacagca
aaactggaaaagcagagccaccgacatcgtcagcaccgactgacgccccggcaattgtgc
ctcgtgctcaagatggcgtctacattcgtaagcgccgtatcccgcttctttgttggtcgt
catgatgtagcggaggctgtgaaaggcgtagctcatcggcttatggaatgcgcagttcac
atgctgccaagtgaggcggtgcttgttcgagatcatcgactcaccactgaagtactgaag
gtgattgataccgtgctatcgcaaacggattctgctgtcgtttccccccacaaagtttac
gcatacgttttggagaaggtgaacaaggttgctcgctgctctaacgtgaaagttcaagag
ggttgctttgaagtcttgaaaacgctcagttctcgggccgaggcaagtgtatttgtaggt
gatgtttttaagacgctgctggacttcgtgttggatttcgacggcgcagtacaaagcggg
ttggtattggaggtactgagtggcattgctcgcccggcactcctgtatcaacaaaaagag
agcgttccctgcgtcgtatcacagcccttgcattcatctttcgtcggagcagattttgaa
aatcttatgagccttttcgagtctcgtgaacgcgatggaagtgagtggaatggagcctgc
cgacaaattatggaccgaattgaaccagacacggtggccatcagtaaatccgacgtgctt
ctgggtgcagttcggcaagcagccgcatggtgcgttcagaatcgattacgcacacacttt
ggaggaccagctcaaaccttttcaagcatcgaacaactggtgcaggagtactcgaatggg
ggtcaaagcttagccgagacggcggagccgcaccagttgacaaagtggttgatgctggaa
tttattaccgccttggagatgagcatcactcgtgctatttacgctactgaaatcgatcaa
agcaatccagacgctgaagagtacaaggcagtgcttttctttcgtacgaacaaggtggtg
tgtgacgattggcttaaccgtattcggccgtatctcgtggagttgtccaggaacggaacg
tcctacgagcagtgccggtatcacagccacgcaatggtgacaacctgctacaataagctc
agcagaacaatggcgtcatttgcaacacacgggttttcagacaaaggatacaacgagctg
aaacaagcggaaaaggacatggatgttgcactcttcttcctgtgtcgttgtcattgcgat
gcaaaagatgtcgacactatcattggttttcaaaagtggggtgaatcggtttccgccgcc
cttacaagttggtaccagctaaacaaggagaagttgggtatcactgaagaactatgcgat
ttctcatttttccgatggctgaatgcagtgcgatatgaggctgaaatgcgctatgaagat
gctgctgcagaatacgaggccttgctcctgccagtgctatctgctcgaagcgaaccactc
tctttgggcggcattagtgccgcggggatctttgagtccccaacgacgtaccttcggatg
tcatctcaagcacttctggggtgcttcaaacaatgcgcgaagtgctatgcgtctctgcgc
gaatggtctaagctgcggatatttgtcagtcagttcgtagaacttgctcagtcgctggtg
aatcatgaccgccccattgaggatattcaggcgatatttgattgcagtgatatcgtggct
gatcgatttcaaaacgatttaattccgttggctttgcagccctcgccgtggaatgggtac
gcgggcgacaaaattggcaagaaagcggaggaaacgttgcttcggatactcggggtctct
acgaggtctcaatttccacttgcgccatttcacaaaacatgtgaaatgcagctcaacctg
aatcctgagttgtatgactctgttgtttggagtcaaccattctgttctgctggtaatgct
ggaggtgctgacacggagagtttgtacctgacgactgtggcccggctggcacggaagcaa
cacaactttgggttcgctcgaagcattttaagagacgctgcagctctcagcggggtgggc
cgtaccgcatctatggctgttagttacgagaaagcgaaattactggaaacagtgggtatg
gaggatgaggcgcgtcgtctcttagaaaaccagtgcgaaacgaacctggcggcaatcgtt
gcgaagcctggaatctttgaacaggaacatccggcccttcgcgctttgctgcatctctcc
acaacatttgcgaaagcagatagtgcagagcttttgtcaccgactacatcacgctttctt
gacgacacggttacaagctttcgtaatgagaagctggctaacctgagcgatatcaacctt
ctatctgatagcccagatacagcggctcacagatgtctcgaagcggcaatttccatatca
cccagatcggcaaaggcctggatcaggtatagtcattggtgttacaatcgaggaaaacgt
gaaattgcagagattgcggagcagaatggatatattcacctagctccgtcggatgaattg
cagatgaattctctactggacgagataggtgtcgttgaaccagaccgtgatttcattatt
cgcgcgttttgccatttcctggataacggggagctggttagccagaaacctgacgaattt
caccaactgtgcattgatcgagcacccgcgactcacgatagtgatgcagttgatcggcta
atccagcttcaacaggcatgtcattccaaggtgctccaatatttcacgttggctgctcgt
ggctacgggaattatttcgccgtaatgttcggcgattcagactgtaaagccccacgacag
gaaacaaccatggtggcgcttcgcttgcttagccttctgacgacctacggattagaaaaa
gatatcgtgtccgcgcttgaagacgtctttgccaacggaccggtagctccatggtcctac
gttgttcctcagctgatcgctcgagcgcatcatccggttgcggctgtttcgtcactggtt
tgcctgattttgaaacgattagctcgtcattcgccccacgcgattgtgtatccggctgtg
gtggattccatggagcctcaagttacattttcagcgcttcaggaagagaaaggagctgcc
agcaacagttttgctgctgttttaaacgagttacagcaagtgtccgctgggcaagtagaa
ggcgtacgtttactcatttcggagcttcggcggatttcgattttgtgggatgaagcctgg
atcagtacgttgatgaagctttcaacagatgttgatcgacgaacagctacgctggaaaaa
gaggcctcccgcgtggacagaaatgcgtcattgtccactaaagaaaaaggtgagctagct
cagcgaaaactggtggccattatgaagccaatcttggtttctgttgaacgactttggagt
gaaacgtgcggtagaattgcggagcagcatgctgtgtcaccgcatgaacgcagattcttg
aaggagtacggaagttcaatcgagaaggcgatggaaatctttcgagattgctgcagctcg
gagttgcgatcgggtccagcatcaggcatctcgagcccgaaagagctctggcaaccgttt
gctgaaatattgaaagcgctactcaactcgactggtcgtagagatcaattgccgcttcac
gagatttcaccctctttggcctcgacctctcgtcagcttgcgctaacaaacatgcccggc
gcgttgtctggcaaggatgtgggtcaaatggagcccataaccattcatcgtgttgactcg
tctgtaacgatactgcgaacgaaaaccaagccgaaatctttggaattaattggatctgac
gggaaaatctacaagtacttgctgaaggctcgagaagatttgcgtttggatgagcgcatc
atgcagtttttaagagttacgaacgagtttttacgcgctgacaacgctgctgcttctcga
gatttatcagctcaaagctacagcgtcatacctctatctcgaaacgctggcttaatccag
atggtcccggacgtggtcccacttttccaagtgtacacatctcgaaacgagcaacaaaca
agccccactggtcgagtacctcaagattcagcagcatcggcatctttggcacagcaacaa
ccacctccgcctacagcacaattttatgcgaagctgaagcaacatggaatttcgaatgtg
gtgccaaatcaccgtgctcagtggccggtccctgtgctaaagcaggtttaccaggaactt
gttactcagcgtccgcgtaatgttctgcagctggagattcttgctcgaagtgaagacttg
cgtgaaagctgggtgaaaagcatgcgattaagcaagtcggtggcggtgatgtccgtctta
ggctacattgttgggctcggtgaccggcaccttgacaacattttgttatgcgttaaaagt
ggagatattgttcacatcgaccacaacatttgtttcgacaaggggcgcaggctcaaggta
cctgaagttgttccattccgtctgacaccaatgctgcaagatgctctcggattcaccggt
gttgagggaaggttccgtgtagcatttgagacgactttacgcgttgttcgctctgatgat
gttcgcgaagcgttgcttacgctgtttgaggcgtttgtctatagtccactcgtcgactgg
attgccgacgataaacgacagggtcggtcgggagatttgaaggcgcgtttggaagtgaac
gtgaacctttccctgtttttatcgagagctgaagagcgccgccaagatacggtttctttc
gggcgccagtacgagcaattggctgacgtcttctcccgtattttcaaaggagcgaaggtg
tcgtttgtgagactgcttgagcaacgggagcaaatgcgtagtctggaagctgaagaacag
gaactattgaaggccgtcacgagtagtgaaactgagctcatggcatcccaagctacactg
caggctaaactggctgaagtacaacagatttctacccaagccgaggaagtcgttgggaag
cttagcgtgttcgcaaaggagtgctggggaagacaccaacaaatcgaagtttggcggcag
aaaagcgttaattttgccgaaacaggcccagaggcccgattgcacgctgtagtgatggca
gccgagtcagcctcgtttcagaaagtccatgctacaatttgcaatgttttggaacggtca
agatttgctggccagcagacagaactgctagccgcgttggaatcgagatctcgatctgtc
gatactgatgtagtacgtctgcgcgtcgagattgaaaggcttgcggcttgtttgatcccc
tacctatccgcttacagccactggcgcaaggaattggatgcgtacctggacacagagctg
aaggtagcaggaaaagatgtgtactttacgtggtggagtcgctgtacgcagtgtttg
DBGET
integrated database retrieval system
