KEGG   Phytophthora sojae: PHYSODRAFT_519698
Entry
PHYSODRAFT_519698 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
psoj  Phytophthora sojae
Pathway
psoj03018  RNA degradation
psoj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHYSODRAFT_519698
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHYSODRAFT_519698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psoj03019]
    PHYSODRAFT_519698
   03041 Spliceosome [BR:psoj03041]
    PHYSODRAFT_519698
Messenger RNA biogenesis [BR:psoj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PHYSODRAFT_519698
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PHYSODRAFT_519698
Spliceosome [BR:psoj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PHYSODRAFT_519698
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 20660209
NCBI-ProteinID: XP_009534064
JGI: Physo3_519698
UniProt: G5A076
LinkDB
Position
Unknown
AA seq 88 aa
LVETISVITNDGRNIIGVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNIS
VIGGVPENIREQVIDDQTRAAPLKPLVH
NT seq 267 nt   +upstreamnt  +downstreamnt
cttgtagagaccatttcggtcatcacgaacgacggccgcaacatcatcggcgtgctcaag
ggcttcgaccagtgcgtgaacgtgatcctggacgacagtttcgagcgcgtgttctcgctc
aaggagccggtggaagccgtggagctcgggctctacatcgtgcgcggcgacaacatctcg
gtgatcggcggcgtgcccgagaacatccgagagcaggtgatcgacgaccagacgcgtgcg
gccccactaaagccgctcgtccattaa

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