KEGG   Phytophthora sojae: PHYSODRAFT_523164
Entry
PHYSODRAFT_523164 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
psoj  Phytophthora sojae
Pathway
psoj03020  RNA polymerase
psoj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHYSODRAFT_523164
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHYSODRAFT_523164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoj03021]
    PHYSODRAFT_523164
   03400 DNA repair and recombination proteins [BR:psoj03400]
    PHYSODRAFT_523164
Transcription machinery [BR:psoj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PHYSODRAFT_523164
DNA repair and recombination proteins [BR:psoj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PHYSODRAFT_523164
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L CorA
Other DBs
NCBI-GeneID: 20660611
NCBI-ProteinID: XP_009534261
JGI: Physo3_523164
UniProt: G5A3M7
LinkDB
Position
Unknown
AA seq 119 aa
MNAPNRSDSYLLPEGAQKVTYEKDTKISNAGKFTILREDHTMGNLIRMQLLRDPNVMFSG
YRHPHPLIHDITVRVQTNDASSPVEALANSLDDLSTEFDEIAQKFRRLTGNSKDPSSFS
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaacgcgccgaaccgcagcgactcgtacctgctgcccgagggcgcgcagaaggtgacg
tacgagaaggacaccaagatctccaacgccggcaagttcaccatcctgcgcgaggaccac
accatgggcaacctcatccgcatgcagctgctgcgcgacccgaacgtgatgttcagcggc
taccgccacccgcacccgctcatccacgacatcaccgtgcgcgtgcagactaacgacgcg
tcgtcgcccgtggaggcgctggccaactcgctggacgacctcagcaccgagttcgacgag
atcgcgcagaagttccgccgtcttacaggcaactccaaggacccgagctccttcagttaa

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