Phytophthora sojae: PHYSODRAFT_528336
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Entry
PHYSODRAFT_528336 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03460
Fanconi anemia pathway
psoj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHYSODRAFT_528336
09124 Replication and repair
03460 Fanconi anemia pathway
PHYSODRAFT_528336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psoj04121
]
PHYSODRAFT_528336
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_528336
Enzymes [BR:
psoj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PHYSODRAFT_528336
Ubiquitin system [BR:
psoj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
PHYSODRAFT_528336
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
PHYSODRAFT_528336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d2
FANCL_d1
SLX1_C
zf-RING_2
zf-ANAPC11
PHD_NSD
zf-RING-like
DUF3383
Motif
Other DBs
NCBI-GeneID:
20661225
NCBI-ProteinID:
XP_009537215
JGI:
Physo3_528336
UniProt:
G5AAM0
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MHFVPENAEHSSFRGYVRVAGDEFAVRVSNVAYDPRTSRVVLDAAQLDVESALAARLKPH
GATLKLRLAQAASLEGFATELEELVALCCKPQANSQAALPNAKYYARLMAELDAVGWNRL
RQLSNDLRSLELETKDQAGRTHAVRVLLPLEYEAPGVAAKPECLVDAPEAFELRWPPDDN
QSVLSEVVAQFEGFLAKFQGFWDVLDVLDAATCVLEPQHPTRATGRRRLALERHASVQFE
VDPAHPTAMLSELSFFGNQANVGALRERWGSNASRWDETKSLQKNLENVLGVALPSPKTT
KPEEFAVECGICYLYRLEGEDESTGERKDGNQRKAVAEEGSRIPNRLCENPNCNRPFHAK
CLFDWLRALPTSRQSFHTVFGECPYCRETISAKFQPGC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgtgcccgagaatgcggagcactcgtccttccgcggctacgtgcgcgttgcg
ggggacgagttcgccgtgcgcgtctcaaacgttgcgtacgacccacgcacaagtcgcgtc
gtcttggacgccgcgcaattggacgtggagagcgcgctggcggctcgcttgaagccacac
ggcgccacgctcaagctgcgactggcgcaggcggcgtctctcgagggcttcgcgacggaa
ctggaggagctggtggccttatgctgcaagccacaggccaacagccaagccgcactaccc
aacgccaagtattacgcccggctgatggcggagctggacgctgtgggctggaacaggctg
cggcagctgagcaacgacttgcgctcgctggagctcgagacgaaggaccaggcaggacgc
acccacgccgttcgagtgctgctgccattggagtacgaggctccaggggtggcagccaag
ccggagtgtctggtggacgctccggaggctttcgagctgcggtggccgccggacgacaac
cagtcggtgctgagtgaagtggtggcgcagtttgaggggtttctggccaagtttcaggga
ttttgggacgtgttagatgtgttggatgcagccacgtgtgtgttggagccgcagcatccg
acgagggccacgggacggagaaggttggcgctggaacgacatgcgtccgtgcagtttgaa
gtggaccctgcacatccgacggccatgttgagtgagctgagcttcttcggcaaccaggcg
aacgttggagcgttgagggaacggtgggggagcaacgcatcgcggtgggatgagaccaag
tccttgcagaagaacttggaaaacgtgctgggggtggcgctgccgtcgccgaagacgacg
aagcccgaggagtttgcagtcgagtgcggcatctgctacttgtatcgacttgaaggggag
gatgagagcacgggagaacgcaaggatggcaaccagcgcaaagcagtggctgaagaggga
tcgaggattccaaaccgactgtgtgaaaacccaaactgcaacagaccattccacgccaag
tgcctgtttgactggctgcgcgcgctgccaacgtcacggcagtccttccacacggtattc
ggcgaatgcccctactgccgtgaaactatcagcgccaagttccagccaggttgctag
DBGET
integrated database retrieval system