Phytophthora sojae: PHYSODRAFT_533639
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Entry
PHYSODRAFT_533639 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
psoj
Phytophthora sojae
Pathway
psoj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PHYSODRAFT_533639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_533639
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_533639
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
PHYSODRAFT_533639
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
PHYSODRAFT_533639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Peptidase_S64
Bindin
Motif
Other DBs
NCBI-GeneID:
20661892
NCBI-ProteinID:
XP_009539109
JGI:
Physo3_533639
UniProt:
G5AG66
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MSPSPSAAAPEAPRASTDTPPPSSLLPDGATPPPSPPLSAASEASDASDFAPSSSSSSDE
DSDYSPGSSSKKKTKTSPKKRKIKRKRLVKGDERKKKRKTAKEEENDEEEDEEELNTGRE
ASKSPKKRTQSERKAAAATWADDGSLDLYRRRLHELRRQLQDAVDEGKKTFYNNPRPVDY
VEEEEQEGENDGDQGGEEGEEEKPKVETGPKFYSPWDVTETASGLLVPSYVLTQLLPHQR
ECLEWLHKLHERGVGGILGDDMGLGKTVQLASFLGSLHRARRLRTVLLLCPASVLLQWVR
ELHKWVPWMRVVLLHASGTGVSTSFSSDSYEQLIDEVFRFEDEMSGDEADGGDEFSGMGG
HAPTGGGVVISTYENVRQYQSLFLTREWDYVVLDEGHRIRNPDAETTLACKQLRTVHRII
LSGTPIQNRLRELWSLFDFVYPGRLGTLPTFDDEFVLPIRAGGYATATKMQVLMAYKCAL
ALKDLIQPFLLRRTKQEVLTNGASGKMGALLPGKQEQILFCRLTKRQRALYKRFLASPEV
ASVLRRDIRPFRAISVLRHICNHPDLLASFGDGRLADKRRQKYDDDEDNEEEQEGLTDLA
GMLDEVDDEGESDEPFGAASASGKMIVLQKILGLWKEQGHRVLIFTQTRSMLDILESFMS
RQGHACCRLDGTTGVAERQQRLDAFNAPDSELFAFLLTTRAGGIGVNLVGADRVVVFDPD
WNPSTDVQARERAWRIGQQKQVTVYRLVTAGTIEEKIYHRQIFKQYLTSKVLHDAKRKRC
FNKHTLRDLFVLADEKEEEDGVAETNELFIAGNVERPAELEDGEEEDNESGGTPESEDSK
SRMEAGDNDAVLKQLFDGGDVRGVFDHSAVESEGVQNQEADLVEIEATKIAQGALSALRA
SGALIRQQRETIYTPTWTGRSGAAGDPTQRRQQPAARGRGRGSSVRGRAGRGRGRGGQGG
GVSSRDMLARIQQRRDGVATQAAQPPARPRVAASASSSAPLNASDMTKRLHAFLVANPAG
VTTERLLESFGNVVAPKDKLVFRHVLRDMAVCRGRRWTLKPSYSVSDAPAGAAPQPPIQR
RRGALW
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtcgccttccgctgcggcacctgaagcccccagagcgtctacagacacgcct
ccaccttcatctcttcttcccgatggtgcaactccgcctccctctccccctttatccgct
gcgtcagaggcttccgacgccagcgacttcgcgccgtcctcttcttcctcgtcagacgaa
gactcggactattcgccaggctccagcagcaagaagaagaccaaaacgagcccaaagaag
agaaagatcaagagaaagcggttagtgaaaggagacgagcggaagaagaagcggaaaaca
gccaaagaagaagaaaatgatgaagaagaggacgaagaagagctaaatactggacgagag
gcctctaaatctcctaagaagaggacgcagagcgagcgcaaagctgcggcggccacgtgg
gcagacgacggcagcttggacctgtacagacgccggctgcatgagctgcggcggcagctg
caggacgcagtggacgaaggcaagaagacgttctacaacaatcccaggcctgttgactac
gttgaagaggaagaacaagagggagagaatgatggtgatcaaggaggagaagagggtgaa
gaagagaagccgaaggtggagacgggacccaagttctactcgccgtgggacgtcacggag
acggcgtcggggcttttggtgccgagttacgtgctgacgcagctgctgccgcaccagcga
gagtgtctcgagtggctgcacaagcttcatgagcgaggagtaggtgggatcttgggtgac
gacatgggcctgggcaagacggtgcagctggcttcgttcctgggctcgctgcaccgcgcg
agacgccttcggacggtgttgttgctgtgtccggcctccgtgttgctgcagtgggtgcga
gagctgcacaagtgggtgccctggatgagagtggtgctgcttcatgcatcgggaactggt
gtaagcacgtcgttctcgagcgattcgtacgagcagcttatcgacgaggtgtttcgcttt
gaagatgagatgtcgggggacgaagcggatggtggcgatgagttcagtggcatgggaggg
cacgcgcctacaggaggaggtgtggtgatcagtacgtacgagaacgttcgccagtaccag
agtctgtttctaacgcgtgaatgggactatgtcgtgctggacgagggccaccgtatccgc
aacccggatgctgagacgacgttggcatgcaagcaactgcgcacagtgcatcgcattatc
ctgtcgggcacgccgattcagaatcgactgcgtgagctgtggtctctgtttgacttcgtg
tatcctggacgcctgggcacgctgccaacgtttgatgacgagtttgtgttacctattcga
gctggtgggtacgcgacggctacgaagatgcaggttttgatggcgtacaagtgtgctttg
gcgctgaaggacctcatccagccgttcctgctccgccgtaccaagcaagaagtgctgacg
aacggtgctagcggtaagatgggtgcgctgttgcctggcaaacaggaacaaatactgttc
tgccgactcaccaagcgtcagcgcgccttgtacaagcgcttcctggcctcacccgaagtt
gcgtccgtgttgcgtcgcgacattcgccccttccgcgccatctcagtgctgcgccacatt
tgcaaccacccggacttgcttgcctcgtttggcgatgggagactggccgacaagcgccgg
cagaagtatgatgacgacgaggataatgaagaggagcaggaagggcttactgatcttgcc
ggaatgctggatgaagtcgacgatgaaggtgagagtgatgaacccttcggtgctgcatca
gcgagcgggaagatgatcgtgctgcagaagatcttgggactgtggaaggagcaaggccac
cgcgttttgattttcacgcaaacgcgcagtatgctggacattctggagagtttcatgtcg
aggcagggacacgcgtgctgccgtcttgatggaacaactggcgtggctgagcgacagcag
cgactggatgcgttcaatgcaccggatagcgagctgtttgcgttcttgctgacgactcga
gctggcggtatcggtgtgaatttggttggagccgatcgtgtcgtggtgtttgatccggac
tggaacccgtccactgatgtgcaagcccgagagcgagcatggcgcatcggtcaacagaaa
caagtgacagtgtaccgactcgtgactgctggaactatcgaggagaagatctaccaccgg
cagattttcaagcagtacctgaccagcaaggtgcttcatgacgcgaagcgcaagcgctgc
ttcaacaagcacacgctgcgagatctgttcgtgctggctgacgagaaggaagaggaggac
ggcgttgcggagactaacgagctattcattgctggaaacgtggagagaccggcggagctg
gaagacggtgaggaagaggacaacgaaagcggcgggacccccgagtcggaggacagcaag
agccgcatggaggcaggcgacaacgacgccgtgctgaagcagctcttcgacggcggcgac
gtccgtggcgtgttcgaccactcggctgtcgagtcggagggtgtgcagaaccaagaggcg
gatctggtcgagattgaagctacgaagatcgctcagggtgctctcagtgcgttgagagca
tctggggccctcatccgacagcagcgcgagaccatctacacgccaacgtggacgggtcga
tcaggggctgcgggtgatcccacccagcgacgtcagcagcctgcagctcgaggtcgcggc
cggggtagcagcgtccgaggtcgagcaggaaggggtcgtggtcgaggtggacaaggcggt
ggagtgtcctcgcgcgacatgctggccaggatccagcagagacgcgacggcgttgcaact
caggctgctcaacctcctgcgcgtcctcgtgttgcggcctcagcttcgtcctctgctcca
ctgaatgctagcgacatgaccaagcggctgcacgcgttcctcgtcgcgaatcccgcgggc
gtgacgaccgagcggctgctcgagagcttcggcaacgtcgtcgcccccaaggacaagctc
gtgttccggcatgtgctgcgtgacatggccgtgtgtcgaggacgtcggtggacgctgaag
ccgtcttactcggtgtccgacgcacctgccggcgcagctccgcagccgccaatacaacgt
cgacgaggtgcgctctggtga
DBGET
integrated database retrieval system
