Phytophthora sojae: PHYSODRAFT_537335
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Entry
PHYSODRAFT_537335 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHYSODRAFT_537335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_537335
03016 Transfer RNA biogenesis [BR:
psoj03016
]
PHYSODRAFT_537335
Enzymes [BR:
psoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PHYSODRAFT_537335
Messenger RNA biogenesis [BR:
psoj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PHYSODRAFT_537335
Transfer RNA biogenesis [BR:
psoj03016
]
Prokaryotic type
tRNA degradation factors
PHYSODRAFT_537335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
CSD
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
20662315
NCBI-ProteinID:
XP_009515918
JGI:
Physo3_537335
UniProt:
G4YPP6
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MLSTAARRLPRAAVARRAAVSAAHLRHQHQRVQTRTLWGLRDLLFGAKKPSEEEAEAAAK
AQAQQQQKQQQQSEAKQSQQSKKEKEVVVGSTDATSYAVGKLAKLADGAVLASCGRTVLL
TTVVSGDHNGNPSAGSSAQRDFLPLTVDFRVKSYAVGLIPDNQKRREFTGSDEEVLQSRV
VDRAIRPLFPRDYCEDTQVLATVQSYDPNNDPLVVAVNSASAALSMSDIPWNGPVGCVRV
VEVDGQLVVNPTAPQRDAATLDVLYAGTAERAVMVEASGDEVTEARLDEALDLAHANVLP
AIEEQKKLAAEHGKRKRVYSPLYIAPEVWAKAEELGREGAEALIARGNVGKLARQQGERE
VYSKMLNGMRQHFSTASPPVYDAAIQRAAHDTFQRVLRERILTIANETKGPKNKAVRLDG
RPVRTVRPLEMEAGVLPMAHGSSLFARGETQTLCSVTLGPLERGIRLRGVLNEAREQADP
NVPTPLKNAMLHYEFPPFCVNETGRVGGTNRRMIGHGALAEKAVLPILPSISEFPYTVRM
TSEVVGSDGSSSMATVCGVSLALMDAGVPVRRAVAGIAIGLVTAGDPFAGQEKRIEEGEY
QLVTDILGSEDHYGDMDFKVAGTTAGVTALQLDVKLPGGVPLPVLKEGLREAKQARLHIL
RRMSNELAEPRETLKSSGSALPNVSVECIIPTNMIGALIGVGGSNIRELEARFNVSVSIV
DRREGIVRVVGSADDAEKAREWLRTDLAAVANAGPRGNNNNNENGNGNGNGNYNSRDNDQ
QGSNKGRSFFFRKDERYTMRVTQVMDFGAILESSAGQRGFVHISELSRDKVSNIHDVVSE
GQEMEFECLQDGASGKMSRRVILAAEDNGETSSTSTSSESSEPTTPRAGHHHARRASSSP
AGAGKRRPKTARRPRTQSK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgactgctgctcgtcgccttccgcgcgccgctgtggcgcgccgcgccgccgtg
tctgctgcgcacctccggcaccagcaccagcgcgtccagacgcgcacgttatgggggctg
cgtgacctgctcttcggcgccaagaagccgtcggaggaggaggcagaggcggctgccaag
gcccaagcgcagcagcagcagaagcagcagcagcagagcgaggccaagcagagccagcag
tccaagaaggagaaggaggtcgtggtcggcagcacggatgccacgtcttatgctgtgggc
aagctcgccaagctcgcggacggcgccgtgctggcctcgtgcggccgcacggtgctgctc
acgacggtcgtgagcggtgaccacaacggcaacccgtcggcgggctcgtcggcccagcgc
gacttcctgccgcttacggtggacttccgcgtcaagtcgtacgccgtgggcctcatcccg
gacaaccagaagcgccgcgagttcaccggcagcgacgaggaggtgctgcagtcccgtgtg
gtggaccgcgccatccgcccgctgttcccgcgcgactactgcgaagacacgcaggtgctg
gccaccgtgcagtcgtacgacccgaacaacgacccccttgtggtggcggtcaactcggct
tcggcggcgctgagcatgtccgacatcccctggaacggaccggtcggctgcgtgcgtgtc
gtcgaggtggacggacagctcgtggtcaaccctactgcgccgcagcgcgacgctgcgacg
ctggacgtgctgtacgctggaactgctgagcgcgctgttatggtggaggcctcaggtgac
gaggtgactgaggcccgcctcgacgaggccttggacctggcacacgccaacgtgctgccg
gctattgaggagcagaagaagcttgcggctgagcacggtaagaggaagcgcgtgtactcg
ccgctgtacatcgcgccggaggtgtgggccaaggcggaggagctgggccgcgagggtgcc
gaggcgctgattgcgcgtggaaacgtcggcaagcttgctcgtcagcagggagagcgcgaa
gtctacagcaagatgctgaatggcatgcgtcagcacttctcgaccgcttcgccgcctgtg
tatgatgcggctatccagcgtgcagctcacgacaccttccagcgcgtgctccgtgagcgc
atcctgaccattgccaacgaaacgaagggcccgaagaacaaggccgtgcgtcttgacggc
cgacctgttcgcaccgtgcgtccgcttgagatggaagcgggtgtgctgccgatggctcac
ggctcctcccttttcgctcgtggtgagacgcagacgctgtgctccgttacgttgggacct
ctggagcgtggcattcgtcttcgcggtgtgctgaacgaggcgcgtgagcaggctgacccg
aacgtgcccactccgctgaagaatgccatgctgcactacgagttccctcccttctgtgtg
aacgagactggtcgcgttggtggcactaaccgccgcatgatcggccacggtgctcttgcc
gagaaggccgtgctgcctattctcccgtcgatctcggagttcccgtacactgtgcgtatg
acctcggaagtggtgggctcggacggatcgtcgtccatggctacggtgtgtggtgtttct
ctggcgcttatggatgctggtgttcctgttcgccgtgccgttgctggtatcgcaatcggt
cttgttactgctggtgacccgttcgccggccaggagaagcgcattgaagagggtgagtac
cagttggtgaccgatatcctgggctcggaggaccactacggtgacatggacttcaaggtg
gctggcacgactgctggtgttacggctctgcagctggatgtgaagcttccgggtggtgtg
ccgctccctgtgctgaaggagggactgcgcgaagccaagcaggctcgcttgcacattttg
cgccgcatgagcaacgagctcgctgagccgcgcgagaccctgaagtcgagtggcagtgcg
ctgcccaacgtgagcgtggagtgtattattcccacgaacatgattggagctctgattggc
gtcggcggcagcaacattcgcgagctggaggcgcgcttcaacgtgtcagtgagcattgtg
gaccgtcgtgaaggcatcgtgcgtgttgtcggctctgctgacgatgctgaaaaggctcgc
gagtggctgcgcactgaccttgctgccgttgcgaatgctggtcctcgcggcaacaacaac
aacaacgagaacggcaacggcaacggcaacggtaattacaacagtcgtgacaacgaccag
cagggctcgaacaagggccgatcattcttcttccgcaaggacgagcgctacaccatgcgc
gtgacccaggtgatggacttcggggctatccttgagtcttctgctggccagcgtggtttt
gtgcacatttcggagctgtcccgcgacaaggtcagcaacatccacgacgtcgtgtccgaa
ggccaagagatggagttcgagtgcctgcaggacggagcctctggcaagatgtcccgccgc
gtgatcttggctgctgaggacaacggggagacctcgtcgacttccacttcctcggagagc
tcggagccgacgacgccgcgcgccggccaccaccacgcccgccgagcatcttcatccccc
gctggtgcgggtaagcgccgtccgaaaaccgctcgccgtccgcgcactcagtccaagtag
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