Phytophthora sojae: PHYSODRAFT_538125
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Entry
PHYSODRAFT_538125 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_538125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_538125
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_538125
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHYSODRAFT_538125
Spliceosome [BR:
psoj03041
]
Complex A
U1 snRNP components
U1 related factors
PHYSODRAFT_538125
Complex B
PHYSODRAFT_538125
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHYSODRAFT_538125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
20662341
NCBI-ProteinID:
XP_009517254
JGI:
Physo3_538125
UniProt:
G4YL64
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MYGGGGDRYGDSSSRRGGGFGGGGDLGSNLDTHIQWDLSKLPVFEKNFYYEHPDVSKRTE
EDYEKWKRDNQIIVSGKGVPKCVLSFEEASFPEYVLEEVVRLGFDKPTPIQCQGWPMALS
GRDMVGISATGSGKTLAFLLPAIVHINAQVRNLQQTLFRGFFSREGVKRSSEREQHANTS
NPSALACVCFLPYLQPGDGPIVLIIAPTRELAVQIQAECNKFGASSKIKNTCVYGGVPKG
GQIADLRRGVEICICTPGRMIDMLSMGKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQ
IRPDRQTLMWSATWPKEIVSLANDFLTDFIQVTVGSLDLTANKRIKQIVEVMDDHQKYNS
LQDHLRDIYEGGRIIIFCETKRGADELSRNLRNTRYMCKAIHGNKSQEERDYVLREFKDG
RTQILVATDVASRGLDIKDIRYVVNFDMPKNIEDYIHRIGRTARAGNKGTSISFFTPTNN
ARLAGPLVKILEEAEQEVPRDLRDLVGRGGGGGRGRGGYGGGRGRW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggcggcggcgaccgatacggcgactcttcctcgcgccgcggcggcggcttc
ggtggcggcggcgacctgggctccaacctggacacgcacatccagtgggacctgtcgaag
ctgccggtcttcgagaagaacttctactacgagcacccggacgtgagcaagcgcacggag
gaggactacgagaagtggaaacgcgacaaccagatcatcgtgtcgggaaagggcgtgccc
aagtgcgtgctgtccttcgaggaggcgtccttccccgagtacgtgctggaggaggtggtg
cgtctgggctttgacaagcccacgcccatccagtgccagggctggcccatggcgctctcg
ggtcgcgacatggtgggcatttcggcgacgggctccggcaagacgctggctttcttgctg
cccgcgatcgtgcacattaacgcacaggttcgtaacttgcagcagactcttttccgagga
tttttctcgcgtgagggtgtaaaacggtcttcagagcgtgagcagcacgcgaacacctca
aatccctcggcgctcgcttgtgtttgctttctcccttacctgcagcccggcgacggaccg
attgtgctgatcattgccccgacgcgtgagctggccgtgcagatccaggcggagtgcaac
aagttcggcgctagctccaagatcaagaacacgtgcgtgtacggcggtgttcccaagggc
ggccagattgctgacctccgccgtggtgtcgagatctgcatttgcacgcccggtcgtatg
atcgacatgctgagcatgggcaagacgaaccttcgccgtgtgacctacctggtgcttgac
gaggccgatcgcatgcttgatatgggtttcgagccgcagcttcgcaagatcgtgagccag
atccgtcccgaccgtcagacgctcatgtggtcggccacgtggccgaaggagattgtgtcg
cttgccaacgacttcctgacggacttcattcaggtgacggttggctcgctggatctgact
gccaacaagcgcatcaagcagattgtcgaggttatggatgaccaccagaagtacaactcg
ctgcaggaccacctgcgcgacatctacgagggcggtcgcatcattattttctgcgagacg
aagcgtggcgccgatgagctcagccgcaacctgcgcaacactcgatacatgtgcaaggct
atccacggtaacaagtcgcaggaggagcgtgactacgtgctgcgcgagttcaaggacggc
cgcacgcagattctggtagccacggatgtggcttcgcgtggtctggatatcaaggacatt
cgctatgtggtcaacttcgacatgcccaagaacattgaggactacattcaccgtatcggt
cgtactgcccgtgccggcaacaagggtacgtcgatttccttcttcacgcccaccaacaac
gcgcgccttgccggacccctggtcaagatcctggaggaagcggagcaggaagtgccgcgt
gacctgcgtgaccttgtgggccgtggaggtggcggcggccgcggccgcggtggctacggc
ggtggccgtggacgctggtaa
DBGET
integrated database retrieval system
