Phytophthora sojae: PHYSODRAFT_544074
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Entry
PHYSODRAFT_544074 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_544074
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PHYSODRAFT_544074
Spliceosome [BR:
psoj03041
]
Complex C
Other components
Complex C specific factors
PHYSODRAFT_544074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
20662524
NCBI-ProteinID:
XP_009525673
JGI:
Physo3_544074
UniProt:
G4ZFB2
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MGCRVGEEVGYAVRFEEKWDPERTKIKFVTDGLLLRETMRDPLLSRYSVVMLDEAHERNL
ETDLLLGLIKKIQRKRPDLRVIIASATLQVDTFVRFFRSKRKDMGQNGETGSTKSSPVLK
DVVAVSVEGRQFPVDIEYLQEPCGDYLQKAIDTVLAIDEREGEGDVLVFLPGQEEIDFVV
RALNDRAPTHMLPVPLYGTLPLHMQQNAFLPAPRGVRRKVIVATTIAETSVTIEGVVFVV
DGCFTKLAFFNPLTGVEALLTAPVSKASAKQRAGRAGRSRPGKCFRLCTQEHFRTKLAKE
TIPQMQRTNLATVALYLLSMGIQDLAHFDFVSSPSPEALIRALELLFSLGAIDTDCRLVD
PLGTQMAEFPVAPALAKVLLSSFRFDCTREILSIASVLSVGDVFLASRGSRERQEKIAEA
MEHFAHPDGDHMMYLAIYDEFVDNNKSRSWCDEYLLSHRALLRATEIRRHLKRYVTRFKS
LGNGNGGEEDYVSLGSGNDEDDKARSAVIRKCLVSGYFANAAKLHADGVYRTLRDQRPVQ
LHPTSVYYHMGTLPDWILFHQSVLTTEEFVRDVSRIDPRWLVDLAPDFYRAKEVSGAISG
SSGALGLPSAPSSTVSKNKKQKTAKEPDTPPRAATGADGRILFRKPKRSGQDAKSKLPVH
IGKSKGGLRSQF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtcgggtcggggaggaggtgggctacgccgtccggttcgaggagaagtgggac
ccggagcgcaccaagatcaagttcgtcacggacggactgctgctgagagagaccatgcgg
gacccgctgctgtcgcgctactcagtcgtgatgctggacgaggctcatgagcggaatttg
gagacggacttgctgctcgggctgatcaagaagatccaaaggaagcggccggatctgcgg
gtgattatcgcatcggcgacgttgcaagtggacactttcgtgcggttcttccgctcaaag
aggaaggatatggggcagaacggtgaaactgggtcaaccaagtcgtcgccggtgctgaag
gacgtcgttgcagtgtcagtggaaggacgacagtttcccgtggacattgagtacctccag
gaaccgtgtggcgattatctgcagaaagctatcgacacagtgctggcaattgacgagcgt
gaaggggaaggtgacgtactggtgttcctacctggccaagaagagatcgatttcgtcgtc
agagcgctcaacgacagagccccaactcatatgctgcctgtgcctctgtacgggacgctg
ccactgcacatgcagcagaacgcattcttgccggcgcctcgaggagtgcgacgcaaggtg
atcgtggcgaccactatcgccgagacgtccgtgactatcgagggtgtcgtcttcgtggtg
gacgggtgcttcaccaagcttgcgtttttcaacccgctcacaggagtggaggcgttgctt
acagcgcctgtatctaaggcttcggcaaagcaacgagctggacgcgcaggtcggtcacgc
cccgggaagtgctttcgcctctgcacacaagagcacttccggaccaaactcgccaaggaa
accatcccgcagatgcagcggacgaatctggcaaccgtggcgttgtacttgctgagcatg
ggcattcaggacctggcacacttcgatttcgtgtcgtctccgtcgccagaagctctgatc
cgcgctctggagctgttgttctcgcttggagccatcgacacggactgccgtctcgtagat
ccactgggcacacaaatggccgagtttccagtggctccagcgctcgccaaggtgctgttg
tcgtcgttccgcttcgactgtacacgcgagatactgagcattgccagtgtcttatcagtt
ggagatgttttcctggcttcacgcggttccagagagcgacaggagaaaatcgcggaggcc
atggagcattttgctcatccggatggtgaccacatgatgtacctggcgatatacgacgag
ttcgtggacaacaacaaaagccgctcgtggtgtgacgagtacttgctgagccatcgcgca
ctgttgcgagctacggagattcggcggcatctcaagcggtacgtgactcgcttcaagtcg
cttggaaatggcaacggcggcgaggaagactatgtgagccttggcagtggcaacgacgaa
gacgacaaggctcgcagtgccgtcatccgcaagtgcctggtcagtggctactttgcgaat
gctgctaagctgcacgcggacggagtgtaccgcaccctgcgcgaccagcgaccggtgcag
ctccacccgacgtccgtgtactaccacatgggcacgctgcccgactggatcctgttccac
cagagcgtgctcaccacggaggagttcgtgcgcgacgtgtcccgcattgatccgcgttgg
ctcgtggatctcgcacccgatttctaccgtgccaaggaagtgagcggagcgatatcgggc
agctctggagcgctggggttaccgtccgctccgtcatcgacagtgtcaaagaacaagaag
cagaaaaccgccaaggagcccgacactcctcctcgagcagctaccggcgccgatggccgc
atcctgttccgaaagccgaagcgctcaggccaagacgccaagtccaagctgcccgtgcac
atcggcaagagcaaaggaggactgcgctcgcagttctag
DBGET
integrated database retrieval system
