Phytophthora sojae: PHYSODRAFT_551733
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Entry
PHYSODRAFT_551733 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
psoj
Phytophthora sojae
Pathway
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_551733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_551733
Spliceosome [BR:
psoj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PHYSODRAFT_551733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
20662758
NCBI-ProteinID:
XP_009539955
JGI:
Physo3_551733
UniProt:
G5AIQ4
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MSRSALTRHALQKSLRGQSAQDQPPEETQRRVKQDELPIYGNDSTYNLNTLLHQNILQSA
YFHELYKLRTYHEVVDEIYYRVDLAEPWSPGTARIPSSCFCLLHKFFLMRLTRKQMQGLL
RHTDSPYIRVVGFLYLRFTCDPEELWTWFEPYLEDPEEFNASANPSLKTTIGEWLISLLE
ENNYFGTILPRIPKKIEDGIKVKLLLLSRKKERAKENLAIVDRLKPGTKIRAMYADEENE
PAMYDAVIDKVEEGNQFWVSFPAYGNTEKVSLGDIEFDKGKQHRRRRNRSRSRSQTRSKT
SGGDITGDLLQQVRERERRKAEAVGRDYASRPVSYKGSLSLKLDRWTTRKRSRSPTKRDE
VVVVQPGMSTGDERPRSRSPSPGKAREAEERLKKLRAMYGDASAKPKEE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcggcgctgacgcgccacgcgctgcagaagtccctgcgcgggcagagcgcg
caggaccagccgccagaggagacccagcgccgcgtcaagcaggacgagctgcccatctac
ggcaacgactcgacgtacaacctgaacacgctgctgcaccagaacatcctgcagtccgcc
tacttccacgagctctacaagctgcgcacataccacgaggtcgtggacgagatctactac
cgagtggaccttgccgagccctggtcgccaggcaccgcgcgcatcccgtcgagctgcttc
tgtctgctgcacaagttcttcctcatgcgcctcacgcgcaagcagatgcagggcctgctg
cgtcacacggactcaccgtacatccgcgtggttggcttcctgtatctgcgcttcacgtgc
gaccctgaggagctctggacgtggttcgagccgtacctggaagacccggaggagttcaac
gcgtccgccaacccgagcttgaagacgaccattggagagtggctgatcagcctgctggag
gagaacaactacttcggcacgattctgccgcgcatcccgaagaaaattgaggacgggatt
aaagtcaagctactgctgctgtcccgcaagaaagagcgcgcgaaagaaaacttggccatt
gtggatcgcctgaaaccgggcacgaaaattcgcgcgatgtacgctgacgaagagaacgag
ccagcgatgtacgacgctgtaattgacaaggtcgaagagggcaaccaattctgggtttcg
tttccggcgtatggaaatacagagaaagtgagtctaggtgacattgaattcgacaagggc
aaacaacacaggcgtcgtcgtaaccgcagccgcagtcgtagtcaaacgcgaagcaagact
agcggcggggatatcacgggggatctcttgcagcaagtccgcgagcgtgaacggcgtaag
gctgaggcagtggggcgtgactacgcctcgcgtcctgtgagctacaagggatctctatcg
ctgaagctcgaccgctggaccacgcggaagcgctcccgtagccccacgaaacgcgacgaa
gtggtagtcgtccagccaggaatgtcgactggcgatgagcgacctcgcagcagatcccct
tcgcctggaaaagcgcgcgaggccgaggagcgtctcaagaagctccgcgcaatgtacggc
gacgcatccgcgaagcccaaggaggagtag
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