Phytophthora sojae: PHYSODRAFT_551952
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Entry
PHYSODRAFT_551952 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
psoj
Phytophthora sojae
Pathway
psoj03030
DNA replication
psoj03410
Base excision repair
psoj03420
Nucleotide excision repair
psoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHYSODRAFT_551952
03410 Base excision repair
PHYSODRAFT_551952
03420 Nucleotide excision repair
PHYSODRAFT_551952
03430 Mismatch repair
PHYSODRAFT_551952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoj03032
]
PHYSODRAFT_551952
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_551952
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_551952
DNA replication proteins [BR:
psoj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHYSODRAFT_551952
DNA Replication Termination Factors
ELG1-RFC complex
PHYSODRAFT_551952
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PHYSODRAFT_551952
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHYSODRAFT_551952
Check point factors
HRAD17(Rad24)-RFC complex
PHYSODRAFT_551952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_assoc_2
AAA_16
RuvB_N
AAA_24
AAA_11
Rad17
Mg_chelatase
AAA_3
ResIII
bpMoxR
AAA_5
DEAD
AAA_2
AAA_7
DUF5338
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
20662773
NCBI-ProteinID:
XP_009515506
JGI:
Physo3_551952
UniProt:
G4YMA1
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MFSTASTSKTNLPAPVLPWVEKYRPKNVDEISHQEHVVATLKTSIANGQLPHLLFYGPPG
TGKTSTIVAVGRQLFGPDFRKNGRFLELNASDDRGIKVVREKVKSFAQGAISSASGLPPF
KIIVLDEADSMTGDAQSALRRMMENYSKVTRFCLICNYVSRIIEPVASRCAKFRFAPLER
GSMASRVRFIASEEHVNVPDPVLESLLECSNGDLRKAINYLQSAKQLCGDDELSQDDVIA
VAGLAPPELLKQFWVSVASNSFEKMKTDIESILLAGYPVLTILRQLNDDVLALDKLNDVQ
KAKISLRIAEADKRLVDGASEHFQLLDVASYAMRVYHSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaccgcgtcgacctccaagaccaacctgccagcgcccgtgctgccctgggtg
gagaagtaccgtccgaagaacgtggacgagatctcgcaccaggagcacgtagtggccacg
ctcaagacgtccatcgccaatggacagctgccacacttgctcttctacgggcccccagga
acaggcaagacgtccaccattgtggcggtggggcgccagctcttcggcccggacttccgc
aagaacggccgattcctggagctgaacgcgtcggacgaccgaggcatcaaggtggtgcgc
gagaaggttaagagcttcgcccagggcgccattagcagcgccagcggactccctcccttc
aagatcatcgtgctggatgaggctgactccatgacgggcgacgcgcagtcggcgctgcgt
cgcatgatggagaactactccaaggtgacgcgcttctgcctcatctgtaactacgtgagt
cgcatcatcgagcctgtggcctcccgatgtgccaagttccgttttgccccacttgagagg
ggctccatggcgtctcgcgtgcgcttcatcgcttccgaagagcacgttaatgtgccggac
ccggtgttggaatcgctgctcgagtgctcgaacggtgacttgcgtaaggccatcaactac
ctgcaaagtgccaagcagctctgtggagatgacgaactgtcccaggatgatgtcattgcc
gtggctggtcttgctccgcccgagcttctgaagcaattctgggtctccgtggcgtcgaac
agcttcgagaagatgaagacggacattgagagcattctgctggctggatacccagtgctc
acgattttgcgccagctgaacgacgatgttctggcgctggacaagctgaacgacgtgcag
aaggcgaagatcagtctgcgcattgccgaggccgacaaaaggcttgtggacggcgccagt
gaacacttccagttgctagacgttgcatcgtacgccatgcgcgtttaccactcggcgtaa
DBGET
integrated database retrieval system
