KEGG   Phytophthora sojae: PHYSODRAFT_552782
Entry
PHYSODRAFT_552782 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K14402  cleavage and polyadenylation specificity factor subunit 2
Organism
psoj  Phytophthora sojae
Pathway
psoj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PHYSODRAFT_552782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psoj03019]
    PHYSODRAFT_552782
Messenger RNA biogenesis [BR:psoj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PHYSODRAFT_552782
    U7-dependent histone pre-mRNA processing factors
     PHYSODRAFT_552782
SSDB
Motif
Pfam: Beta-Casp CPSF100_C RMMBL
Other DBs
NCBI-GeneID: 20662853
NCBI-ProteinID: XP_009516751
JGI: Physo3_552782
UniProt: G4YKY5
LinkDB
Position
Unknown
AA seq 513 aa
MMEILKTVRNGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRDPIALLHDMSYYTPKAAQA
MLEWCNDRIAKNFDVGRQNPFQFSHIHLVHTLEELDALPSPKVVLATSPSLECGFAKDIF
IRWAPDPRNSIIFTSTTPETSFASRVLKIAKDPSAAKVISCTVTKKVFLEGAELALYEVK
ERKRLRTEAENKAKEIEEAAMEDMMMGIEDFESESEEEETTQQEVQLRGTFKVGLGQFAS
VRYPMFFAVEPKIEWDEYGEIINPDDFKDATLLANRQARRNIIEDADGDEDMESADKEAA
AETRPTKTITNEVTVSIAARITQVDFDGIADGRAIRNCLGNVKPRKLILVHGTETTTNEL
KKFVESSIPLCEAVFTPNVMECIDIESDTNVYKLSVKESLYTSAVGSHEVAYVTGQLALP
ENSSVPVLQPLNENGGQTTHEPILLSDGKMKLDVMKQVLGKAGFQAKFRGGMLVCNDGVV
LKRAMNNEIVMEGTLSRNYYRIRALLYEQFTLV
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgatggagattttgaagacggtccggaacggaggtaatgtgttgatcccgactgatagc
tcaggtcgtgtgcttgagctgatgcgggtgctcgaccagtactggatccagaacaaactg
cgtgacccgattgcactgctccatgacatgagttactacaccccgaaggccgcccaggca
atgctagagtggtgcaatgaccgtattgcgaagaacttcgacgtcggtcggcaaaacccg
ttccaattctcacatattcaccttgtccatacgctggaggagctagacgctcttccaagc
cccaaggttgttttggctacgtcgccaagcctggagtgtggctttgcgaaggatattttc
atccgctgggcccctgatccaaggaacagtatcatcttcacttcgactacgcccgagacg
tcattcgcatctcgtgtactgaagattgccaaggatccgtccgctgccaaggtcatttca
tgcacagtgacgaaaaaggtgttcttggagggagcagaacttgcgctgtatgaagtgaaa
gagcggaaacgtcttcgcacggaagccgaaaacaaggcgaaggagatcgaagaggctgca
atggaagatatgatgatgggaatcgaagacttcgaatctgagtcagaggaggaggaaacc
acacagcaagaagtccaacttcgaggcacctttaaggttggcctggggcagtttgcttct
gttcggtacccgatgttcttcgcagtggagcccaagattgagtgggatgaatatggagag
attatcaaccccgacgacttcaaggatgcaacgttgctggcgaaccgccaggcccgccgc
aacattatcgaggatgctgatggagacgaggatatggaaagcgccgacaaagaagctgcc
gctgaaactcgccccacaaaaaccatcacgaatgaagtcaccgtcagcattgccgctcgt
atcacccaagtggactttgatggcattgccgacggtcgagcaatccgcaactgtctcggc
aacgtgaagccccgcaagctcatcctggttcacggcacggagacaactacgaacgagctg
aaaaagttcgttgagtcgtccatcccgctgtgcgaggccgtgtttaccccgaacgtgatg
gagtgtatcgacattgagtccgatacaaacgtgtacaagctgtcggtgaaggagtcgctg
tacacgtctgcggttggcagccacgaggtcgcgtacgtcacaggtcaactggcgctcccg
gagaacagctccgtgccggtgttgcagcctctgaacgagaacggcggccagacgacgcac
gaacccatcctgctgagcgacggcaagatgaagctggacgtgatgaagcaggtgctgggc
aaggccggctttcaggccaagttccgcggcggtatgctggtctgcaacgacggcgtggtg
ctcaagcgcgccatgaacaacgagatcgtgatggaaggcacgctgtccaggaactactac
cgcatccgagcgctgctgtacgagcagttcaccttggtgtag

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