Phytophthora sojae: PHYSODRAFT_553621 Help Entry PHYSODRAFT_553621 CDS       T03459                                  Name (RefSeq) hypothetical protein   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism psoj  Phytophthora sojae Pathway psoj03018   RNA degradation Brite KEGG Orthology (KO) [BR:psoj00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PHYSODRAFT_553621  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:psoj03019]     PHYSODRAFT_553621 Messenger RNA biogenesis [BR:psoj03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      PHYSODRAFT_553621 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 KIAA2026_hel HRDC WHIM1 WSD Motif Other DBs NCBI-GeneID:  20662921 NCBI-ProteinID:  XP_009517982 JGI:  Physo3_553621 UniProt:  G4YR27 LinkDB All DBs Position Unknown AA seq 1507 aa AA seqDB search MAEELDAAAFVGALYRKVLLSVKASNAVPSEDDGFHFHSQFSAEFAARSKSSGAKAEALV RLLTKRRCGDADGDDAGDSSDEDEDEQQELFDGPEPNARVTDYADMLLDEATKHLARFVR GETEPSADASTLRPLENKPHVFETNKKARKNEKEGQAEKKMARGAQDKPQDRFDEKIDNS DAPFVSKLREKVHALNDGAAVVADDEDDEMAPRHPYFPEIKALKYAPWQLEASDEPYEMV ELEKASYLWVDSEEKLVQMMKSLTAVEARVIAVDLEHHSYRSYMGLTCLMQISTAREDFL VDTLALRGKLQTLNQVFCDPAKVKVLHGSDMDILWLQRDLGLYIVNLFDTGRAARLLQYP RFSLAYMLKRHCNIDADKQYQLADWRTRPLDKNMVKYAREDTRYLLFIYDRLKKELLQAG AKSRESFLFQTLQNSSKLCLQVYEKPQPTEEDALALGEKLKGTVNTQELSELQKRVIVAL YLWRDRVARQEDESVAYVMANHVLMKLTKHLPVRSDELFRACHPVPLLIRKHALQITKMI VAEKAKLSEEESKAAQAPEPVAVKPTRKTWNEDGEEKIVTSSSLKRVGRAAYAPWKSGQR KAGIAGDASTGSSSSSTAQPMALGIDVAETIIKEPETAAELLEKVNALVASTTFTIAESE PVETPVTQPASLSETPAKDDSSEQESKPKIPQSISEAYHMSNRSKRRKMDTSSASQVKDR AQAFMQKVDGDDSKVDEEDKSGFQSFDYAAASSQVAGAKFELKKNEDEDRRGGRGGRGGR GGNNKKQAGYNPFVGMSGKGKKGKSSDEPQAGRKPVKKMHHMPRSATKNIHNPYHKRYII PLHFSAILEKRTKQPTRSPMARSAALKRVSPASLKSEEGEGAAKKLKASVDVASEAAATV RSGPLEAEDSESDPIDEGDDAQTSTSATSNGIKHDEEDGEEDVEMADAEASAGQETAKIK ADSKKNGAAKSASKKPVKKRAKPAAKSAANGKTKAAAKPKAKAKPAAKPKAKAAPKRKTR TQEDKVKENAPLAAPFFVETGAEWNNTNIDFDELSVLRSRWELPAACHILWLLQSPLTLR FSNTLLEYEAALLKPEDSPVLEDVFTKLLLKKSERECLSAGIGLKYEWWNKQLRIYYLDM YDKWYALLRKAGERLPETFSQDEDDDDDSSADDKTDEQVDVELTDDEWLTLDILKARLET LGMVCPLKHQSFADLSIELRCKILLNLCEAVVDDPANTEYMRQMEDDDLRVEPLGNDRAG NMYYFFPQFYEERRLYRLDPETQQWALWAKGDDAFRSMLKAMKEVRGRKIRGEQELLDHL EVIVEQIEDEDEARARQLEKANRLAILEAIPRKRSLRLQVKQLEKMERHQEELEHQKELS MEEIAEMKRAELLRKVEKEAEKEARDAEREARRLHREQVEREEAQAERERRRLRRIEKEK EDERLEQLAQEERRKQEEARELRARQRHGVEEWQQVEQDDQGAVEDATPTSTAAEAPEQV PAPAKTP NT seq 4524 nt NT seq  +upstreamnt  +downstreamnt atggcggaggagcttgacgccgcggcctttgtgggcgccctgtaccgcaaggtgctgctc tctgtgaaggcgtccaacgcggttccgtccgaggacgatggcttccacttccacagccag ttcagcgccgagttcgcggcgcgctccaagagctccggcgccaaggccgaggcgctcgtg cgactgctgaccaagcgccggtgcggtgacgcggacggagacgacgccggcgacagcagc gacgaggacgaggacgagcagcaggagctcttcgacggcccggagcccaacgcgcgcgtc acggactacgccgacatgctgctggacgaggccaccaagcacctggcgcgcttcgtgcgc ggcgagacggagccttccgccgacgcgtcgacgctgcgaccgctggagaacaagccgcac gtgttcgagacgaacaagaaggccaggaagaacgagaaggaggggcaggccgaaaagaag atggctcgaggagcgcaggacaagccccaagacagattcgacgagaagatcgacaactcg gacgcgcccttcgtgtccaagctgcgcgagaaggtgcacgcgctcaatgacggtgctgca gttgttgcagacgacgaggatgatgagatggctccgcgtcacccgtacttcccggagatc aaggcgctcaagtacgcgccctggcagttggaagcgtccgacgaaccgtacgagatggtg gagctggagaaggcatcgtacctgtgggtggactcggaagagaaactggtgcagatgatg aagtcgctgactgccgttgaggcccgcgtgattgcggtggatctggagcaccatagctac aggtcgtacatgggacttacgtgtctgatgcagatctccactgcgcgcgaggacttcctg gtggatacgctggcacttcgtggcaagctgcaaacgctgaatcaggtcttctgcgacccg gcgaaggtgaaggtgctgcacggtagtgacatggatatcttgtggctgcagcgcgatctt gggctgtacattgtcaacctgttcgacaccggtcgcgcggcgcgtttgctgcagtatccg cgcttctccctggcgtacatgctcaagcgccattgcaacatcgacgctgacaagcagtac cagctggctgactggcgcactcgcccgctcgacaagaacatggtcaagtacgcgcgtgag gatacgcgctaccttttgttcatctacgaccgtctgaagaaggaactgcttcaggctgga gcgaagtctcgtgaaagttttctgtttcagacgcttcagaactccagcaagctctgtttg caggtgtacgagaagccccagccgacggaggaggacgcgttggcactgggcgagaagctc aagggcactgtgaacacccaagaactctcggagctccagaagcgtgtgatcgtagctctg tacctgtggcgcgaccgcgtcgctcgtcaagaggacgagtcagtggcctacgtgatggcc aaccacgtgctcatgaagcttaccaagcaccttccagtgcgctccgacgagctgttccgc gcgtgtcaccctgtgccgctgcttatccgcaagcatgcacttcagatcaccaagatgatt gtcgccgaaaaggcaaaactgtcagaagaagagtcgaaggcagcgcaggctcctgaaccc gtcgctgtcaaaccaacaaggaagacgtggaatgaggatggagaggagaagatagtgact tcatcgagtctgaagcgcgtaggccgtgctgcgtacgctccttggaagagtggtcagcgc aaggctggcattgctggcgatgcttcaactggatcgtcgtcgtccagcactgctcagcct atggctctcggaattgacgttgccgagactattatcaaggagccggagacagcagccgag ctgctcgagaaagtcaacgccttggtggcgagcacaacgttcacaattgcagagagcgag cctgtcgagacaccagtaacgcagccggcgtccttgtccgagacgcccgccaaggatgac agcagcgagcaggagtccaagcccaagatccctcagtccatctcggaggcctatcacatg tcgaaccggtccaagcggcggaagatggacacgtcgtcggcttcgcaggtcaaggaccgg gcgcaggcgttcatgcagaaggtcgacggagacgacagcaaggtcgacgaagaagacaag agtggcttccagagcttcgattacgctgctgccagctctcaggtcgctggagccaagttc gagttgaagaagaacgaggacgaggaccgacgtggcggtcgcggcggtcgtggcggtcgt ggcggcaacaacaagaagcaggccggctacaacccgttcgtgggcatgagtggcaagggc aagaagggcaagagctcggacgagccgcaagctggccggaagcctgtcaaaaagatgcac cacatgccgagaagcgccacgaaaaatatacacaatccttaccacaagcgttatattata cctctacattttagcgccattttggaaaaacggaccaagcagccgacgcgatctccgatg gctcgtagcgccgcgctcaagcgcgtctcgcccgcgtcgctcaagtcggaggaaggggaa ggcgccgccaagaagctcaaggcctcggtggacgtggccagcgaggcggcggccacggtg cgcagcgggccgctcgaggcggaggacagcgagtcggaccccatcgacgaaggggacgac gctcagacgtccacttcagcaaccagtaacggcatcaagcatgacgaagaggacggagaa gaagacgtcgaaatggctgatgcggaggcctcggcgggccaggagacagcaaaaattaag gcagacagcaaaaagaacggggcagccaagtctgcgtctaagaagccagtcaagaagcgc gcaaagcctgctgcgaagtctgctgccaatgggaagacgaaagctgccgccaagcccaag gcaaaggctaagcctgctgcgaagccgaaggctaaggctgcaccgaagcggaagacccgg acgcaggaggataaggtgaaggagaacgcgccgcttgctgcgccattcttcgtggagacg ggggccgagtggaacaacacgaacatcgactttgacgagctaagtgtgctgaggtcgagg tgggagctgcctgcagcttgccatattttgtggctgctgcagagtccgctgacactgcgc ttctccaacacgctgcttgagtacgaggcagcgctgctgaagccggaggatagtcccgtg ctggaagatgtgttcacgaagctgctgctgaagaagagtgagcgcgagtgcttgagcgct ggcattggactcaagtacgagtggtggaacaaacagctgcgcatttactacctggacatg tacgacaagtggtacgcactgctgcgcaaggcaggagaacggctacctgaaacattttcg caagatgaggacgatgacgatgacagcagcgcggacgacaagaccgacgagcaggtggat gtggagctgactgacgacgagtggctgacgcttgatatcctgaaggcgcgccttgaaacg cttggcatggtttgcccgcttaagcaccagtcattcgcggacttgtcgatcgagttgcga tgcaaaattctgttgaacttgtgcgaggccgtggtagatgatccggccaacactgaatat atgcgccaaatggaagacgatgacctgcgcgtggagccgcttggcaacgaccgcgccggc aacatgtattactttttcccgcagttctacgaggagcggcggctgtacagattggacccg gagacccagcagtgggcgctctgggcaaagggggatgacgccttccgctctatgctgaag gctatgaaggaagtccgtggtcgtaagattcgcggtgaacaggagcttctggatcatctg gaggtcattgtagagcagattgaggatgaagacgaagcgcgcgcccggcagctggagaag gccaaccgcctagcgattctcgaggcgatccctcgcaagcgttcgctgcgtctgcaggtg aagcagctggagaagatggagaggcaccaggaggagctggagcatcagaaggagctgtcc atggaggagatcgcagaaatgaagcgcgccgagttgctgcgcaaggtggagaaggaggct gaaaaggaggctcgtgacgccgagcgggaggctcgccgcttacaccgcgagcaggtggag cgggaagaggcccaggctgagcgcgagcgacgccgtcttcgccgtattgagaaggaaaag gaggatgaaaggctggagcagttagcccaggaagagcgcaggaagcaggaagaggcgcgc gagctccgcgcccgtcaacggcacggggtagaggagtggcagcaagtagagcaggatgac cagggcgcggtggaagatgcaacaccgacaagcaccgcagcagaggctcctgagcaggtt ccagcgcccgcaaaaacgccatga

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