Phytophthora sojae: PHYSODRAFT_554000
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Entry
PHYSODRAFT_554000 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03440
Homologous recombination
psoj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PHYSODRAFT_554000
03460 Fanconi anemia pathway
PHYSODRAFT_554000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_554000
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PHYSODRAFT_554000
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
PHYSODRAFT_554000
FA (Fanconi anemia) pathway
Downstream FA components
PHYSODRAFT_554000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Motif
Other DBs
NCBI-GeneID:
20662959
NCBI-ProteinID:
XP_009514731
JGI:
Physo3_554000
UniProt:
G4YGX5
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MSSSAAGAGAGPEDAPPKENAFMIMGYNVEFPRGKRPFPAQFAVMNKVLTALKTEQHALL
ESPTGSGKTLALLCSSLTFQKQFVRDKVAALKKEQEDPKVRAQEAQKQAQEAQLRALEAQ
MQLMEAQQQVEQARRQRQEREGGSTQSTFQSTQETQATQATQATQVAGLKEEDDDDDVAA
TQPSGSNGESNPRLSADGWMSTRKRELDADSTATKKKRVLPKSFAFAAADAGNAASQPAD
SADVGATAVGPDGKPKKKRVVPPRIYFCSRTHSQLAQVVDELKNCPVSYLDSPEDSNTYT
KQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGASCSYFKKRKKANDLRRHVPPVW
DIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPSIREAVGITLKDSIIVLDEA
HNVEDTCRSSASVEVTTEVLAASIKAFSIVIKHGNRPKSYNALLKLLNGINRWLQSVDSN
ANAILQPSGYEEKSKVWDGADALAMLAEYSGLTKDNLAEMKANVQEVREYENELGNSAES
SQQATQSKASQDAAANPTGASVLLGALALATVQSIMNVADYMFRDNLKFIDDFKLVVIKS
TSTWKESASFRSPTKRNGGDEWELKMCIWCLNAAVAFSDIASQARSVILTSGTLSPMESF
AGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSMGQLLLQ
YSQAIPGGILMFFPSYSLLNKLTTRWKKTKLWGEIEQFKTVYSEPRNAGKDFDALLEDYK
DTITKCTAEGDEAQDKKSGAIFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPSVKELQVS
LKRKYQDEKSRMNMKLVNGHVWYHLQAFRALNQALGRCIRHRQDYGAIMLLDSRHRFNKH
TKSLSKWMRPYIQEFEHGQMCVPMFGDFFQRNRMELPQSVPAPPSEKTAGAAPSEWKSKR
APLVLKYEDEKKGKKDSAKAKRMVTPSMSSTLATVKDFMAKQKQDSDPQDSVFSIFRQQP
PKKSS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtgctgccggtgccggtgctgggccggaagatgcgccgcccaaggagaac
gccttcatgatcatgggctacaacgtcgagttcccgcgcggcaagcggccgttcccagcg
cagttcgcggtcatgaacaaggtgctgacggcgctcaagacggagcagcacgcgctgctc
gagtcgccgacgggcagcggcaagacgctggcgctgctgtgctcgtcgctgacattccag
aagcagttcgtgcgcgacaaggtggcggcgctcaagaaggagcaggaggaccccaaggtg
cgcgcgcaggaggcccagaagcaggcgcaggaggcgcaactgcgcgcgctcgaggcgcag
atgcagctcatggaggcccagcagcaggtagagcaggcccggcgccagaggcaggagagg
gagggcggctctacccaatctaccttccagtctactcaggagacccaggccacgcaggcc
acgcaggccacgcaggtggccggcctcaaagaagaggacgatgacgacgatgtggcagcc
acacagcccagtggctccaacggagagagcaacccgcggctcagcgccgacggctggatg
agcactaggaagcgggagctggacgccgacagcacggccaccaagaagaagcgcgtgctg
cccaagtccttcgccttcgcagcggctgacgccggcaatgccgcatcgcagccggcagac
agcgctgacgtaggcgccactgctgtcgggccggacggcaagcccaagaagaagcgcgtg
gtgccgccgcgcatctacttctgctcgcgcacgcactcgcagctggcgcaggtcgtggac
gagctcaagaactgtcccgtgtcgtacctcgactcgcccgaggactccaacacgtacacc
aagcagctgcagacctgcgtgctcggttccaagcgcaacatgtgcgtcaatcgcaaggtg
aaccgcgatccgtcgcaagtggacgagaagtgtcgactggcgctcgagggcgcgtcctgc
tcgtacttcaagaagcgcaagaaagccaacgacctgcgccgccacgtgccgcccgtttgg
gacatcgaagacctcgtcaagctggcgcagaagcaccgcgagtgcgcctacttccacgct
cgtgaagcgctggaccacgccaacatcgtcttcgccccctacaactacctgctggacccg
tcgatccgcgaggccgtggggattacactcaaagactccatcatcgtgctggatgaggcg
cacaacgtggaggacacgtgccggtcgagtgccagtgtggaggtgactacagaggttctg
gcggcgtcgatcaaggccttctcgatcgtgatcaagcacggcaaccgacccaagtcgtac
aacgcactgctcaagctcctgaacggcatcaaccgctggctgcagagcgtcgactctaac
gcaaacgccatcctccagccctcgggctacgaagagaagagcaaggtctgggacggtgct
gacgcgctagcgatgctggccgagtactccggattgaccaaggacaacctggccgagatg
aaagctaacgtgcaagaggtacgtgagtatgagaacgagctgggcaacagcgcggagtcg
agtcagcaggccacccaaagcaaggcgtcacaggatgcggcagcgaaccctacgggcgcc
tctgttcttctcggcgcgttggctttggccacggtgcagagtatcatgaacgtggctgat
tacatgtttcgcgacaacctcaagttcatcgacgacttcaagctggtggtgatcaaatca
acgtccacgtggaaggagagcgctagtttccggtctcctaccaagaggaacggtggcgac
gagtgggagttgaaaatgtgcatctggtgtctgaatgcggcggtggccttctcggatatt
gcgagccaagcgcgtagtgttattctcacgtcgggtacactgagtcccatggaatcgttt
gccggggagctgggcgtggacttccccatccgcctcgaggccaaccacgtcgtaaatatg
cgcaagcaggtgttcatcggggccgtgatgcacggccctggcaacgttgaccttcagtcc
acgtacaacaaccagcaagaccccaggtatcaggactccatgggccagttgttactgcaa
tactcgcaagcgattccaggcggcattttgatgttcttcccgtcgtactctctgctgaat
aaactcactacacgctggaagaagacgaagttatggggcgagatcgagcagttcaagacc
gtgtactcagaaccacgcaacgctggcaaagactttgatgcgctactcgaagattacaag
gacaccatcaccaagtgcacggcagagggcgatgaagcacaggacaaaaagagcggtgct
atcttcctggccgtttatcgcggcaaagtgagcgaaggtatcgatttctccaacgacaac
gcgcgagcggtgctctgtgtgggcatcccattccccagtgtcaaggagctgcaggtgtct
ttgaagcgaaagtaccaggacgagaagagccgcatgaacatgaagctcgtgaacgggcac
gtttggtaccatctccaagcgttccgtgcgctcaaccaagcgctggggcgttgcattcgc
catcgccaggactatggagccatcatgctgctggattccagacaccgcttcaacaagcac
accaagtcgctgtccaagtggatgcgcccgtacatccaggagttcgagcacgggcagatg
tgcgtgcccatgttcggcgacttcttccagcggaacaggatggagctaccgcagtcggtg
ccggcgcctccgtcggagaaaactgccggagcggccccctcggagtggaagtcgaagcgc
gcaccacttgttctcaagtacgaggacgagaagaaggggaagaaggacagtgccaaggca
aagcgcatggtcacgccctcgatgtcgtcgactctggcaactgtgaaggactttatggca
aagcagaagcaggactcagacccgcaagacagcgtcttctcgatattccgccagcaacct
ccaaagaaatcaagctag
DBGET
integrated database retrieval system
