KEGG   Phytophthora sojae: PHYSODRAFT_554134
Entry
PHYSODRAFT_554134 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
psoj  Phytophthora sojae
Pathway
psoj03020  RNA polymerase
psoj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHYSODRAFT_554134
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHYSODRAFT_554134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoj03021]
    PHYSODRAFT_554134
   03400 DNA repair and recombination proteins [BR:psoj03400]
    PHYSODRAFT_554134
Transcription machinery [BR:psoj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PHYSODRAFT_554134
DNA repair and recombination proteins [BR:psoj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PHYSODRAFT_554134
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 20662973
NCBI-ProteinID: XP_009514985
JGI: Physo3_554134
UniProt: G4YH09
LinkDB
Position
Unknown
AA seq 242 aa
MPHPRFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMT
DEFLAHRLGMIPLNFDGGLENFRQRFVYSADCDCDENCPNCSVEFSLDVTADNGVLSVTS
EALKSSDPYIRPVNFSSEEELNNTQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPV
AVATYMYDPIITLNQAVLSTYTPEQKAELYKSCPTEVYETDENYEQVRCCAWKVDFILEE
AD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgccgcacccgcgcttccccaagatcgagatccaggagctgcgcgacgacttcatccgc
ttcgagctgtcggagacggacgccagcgtggccaacgccatccggcgcgtcatgatctcg
gaggtgccgacgctggccatcgacctcgtgagcatcgagatcaacacgtccgtcatgacg
gacgagttcctggcgcaccgcctgggcatgatcccgctcaacttcgacggcggcctcgag
aacttccgccagcgcttcgtgtactcggcggactgcgactgcgacgagaactgccccaac
tgcagcgtcgagttctcgctggacgtgacggcggacaacggtgtgctgtccgtcacgagc
gaggcgctcaagtcctcggacccgtacatccgccccgtcaacttctcgtccgaggaggag
ctcaacaacacacaggacagcggcgtcatcatcgcgaagctcggccccggccagagactg
cgcctctcggccatcgccaagctcggcattggcaaggagcacgccaagtggtcgcccgtg
gccgtcgccacgtacatgtacgaccccatcatcacacttaaccaggccgtgctcagcacg
tacacgcccgagcagaaggccgagctctacaagagctgccccacggaggtgtacgagacg
gatgagaactacgagcaggtgcggtgttgcgcttggaaggtggactttattttggaggag
gctgactga

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