Phytophthora sojae: PHYSODRAFT_555033
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Entry
PHYSODRAFT_555033 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
psoj
Phytophthora sojae
Pathway
psoj03013
Nucleocytoplasmic transport
psoj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHYSODRAFT_555033
03015 mRNA surveillance pathway
PHYSODRAFT_555033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_555033
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_555033
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PHYSODRAFT_555033
Spliceosome [BR:
psoj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
PHYSODRAFT_555033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
API5
RRM_1
Motif
Other DBs
NCBI-GeneID:
20663047
NCBI-ProteinID:
XP_009520370
JGI:
Physo3_555033
UniProt:
G4YXT9
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MAAEDALGELYAWDSTIEDDVALPAGDPKRDEDKTEDAYEQIIHAASSDAGDVVLSLAAQ
LLHKHFFRFPHVQLNVVDVLLKLCGPKRSQAVRIHTLRALLQIAKTPPAAAAASTPTSAA
AIARKNTRMWLQRIDEAVQHMLDTEKSSVILRQVTMLRHTLEERLLTDPEGKSKAAADAS
GDDQRSTQTSPSERSRKKPRDESDAADADGAVSAERDPKKAKHDDDAKPPTENSNIIKLN
REPSSDKQQILNGRLVESEGRRRTVSAFSPRNCPPCPYLFLGSVPRHTPSDDIVEFLTPV
WPEINKMSVQIKQPDHNATAYAFVSMPTIEHAREAIHYVNANKFRGRAFLNANFARGPPV
DTVLFVERTGEDVSMEDKGAVRDFDFTKCDPEVWDNLCQQLERFGPLSFAENGCVRFRNV
EHAKAAIRKQLFTVKGYEIFPVYDTKEQFSIDSTRHGGIPHSKQGFALKSGRLVGGDTDY
RSSKRRHYREDDDPMDGTSGRRAHDRVASLKYGERSGSARSPPRSDRGSARGRSRSRSPR
PHNVSGRYVVPMEGPPSERRLPHSRSRSPVTLAKQVSREGGYGTPSDKENRREYRGKYGH
RSLSPVDIRNHESSVPVEEVRGRPRERGERDGAWMGSREESRERRGPRDEGRGRGSFHRG
SSPSPSSSSRRSRKDDHRSSDYRRGGNSHEEVRQSYRREEEERGRMPPPPLSGGVLQLPR
SHSRSPPRFGKYAGGSSKSRPRSRSRSPPQDLRMGSSSHSRTGGYRGRDDRLVGNQVPED
RSAFQPERPRYADDRSIAEVARDEQQERQRFFQQQNQGRRDYHDSDLSRYGGGRGGGRGG
GRGRGSRSERPRPEYQDQPSYRGGGRNGAMYPPQRRSPSPLPPPSHHRSQSPPPQSRRRS
PSPLPPPSQQRESYERGKRGEYVPRGRDAGYSPPPSPLLQSYGPGPSGPSDRQEFDLEMT
DRDGREPSRHERRHHSRRDRSRDDKGHRSHRDRDRREKRSSRPERSLTPSPVRRDLASSS
TGRKSNGPSPRRSFSRRNDGDNQAEEASGKDKLARSKDEDDSEPQQKEMKNGGTRMARDE
LFAGMDDLTVDYEEDDE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaggacgcgctgggcgagctctacgcctgggactcgaccatcgaggacgac
gtggcgctgcccgcgggcgaccccaagcgcgacgaggacaagacggaggacgcgtacgag
cagatcatccacgcggccagcagcgacgccggcgacgtggtgctcagtctggcggcgcag
ctgctgcacaagcacttcttccgcttcccgcacgtgcagctcaacgtcgtggacgtgctg
ctcaagctctgcgggcccaagcgctcgcaagccgtgcgcatccacacgctgcgcgcgctg
ctgcagatcgccaagacgccgccggccgccgccgccgccagcacgcccacgtccgccgcc
gccatcgcgcgcaagaacacgcgcatgtggctgcagcgcatcgacgaggccgtgcagcac
atgctggacacggagaagtcctccgtcatcctgcgccaggtgacgatgctgcgccacacg
ctcgaggagcgtctgctcacggacccggagggaaaaagcaaggccgctgcggacgccagt
ggcgacgaccagaggagcacccagacgtcgccctcggagcgcagccgcaagaagcccagg
gacgagagcgacgcggcggacgctgacggcgccgtgtccgccgagcgcgacccgaagaag
gccaagcacgacgacgacgccaagcctccgaccgagaacagcaacattatcaaactgaac
cgcgagccgagcagcgacaagcagcagattctcaacggccgcctggtcgagagtgagggc
cgacgccgcaccgtcagcgccttctcgccgcgtaactgcccaccctgcccgtacctgttc
ctcggcagcgtgccccgccacacgcccagcgacgacatcgtggagttcctgaccccagtg
tggcccgagattaacaagatgagtgtgcagatcaagcagccggaccacaacgccacggcc
tacgcgtttgtgagcatgccgacgattgagcacgcgcgtgaagccatccactacgtcaac
gcgaacaagttccgtggccgagcgttcctgaacgcgaacttcgcgcgcggtccgcctgtg
gacactgtgctgtttgtggagcgaacgggtgaagatgtgagcatggaggacaagggagct
gtgcgtgactttgactttaccaagtgtgaccccgaggtgtgggacaatttgtgccagcag
ctggagcgctttggtccgctgtctttcgctgagaatggctgcgtgcggttccgcaacgtg
gagcacgccaaggcggccatccgcaagcagcttttcactgtgaagggctacgaaattttc
cccgtttacgacacgaaggaacagttttcaattgattcgacgcgtcatggaggcattccg
cacagcaaacaagggtttgctctgaagtcgggacgtcttgttggaggagatacggactat
cgcagcagtaagaggcgccactacagggaggatgatgaccccatggatggaacaagtgga
cgtcgggcgcatgatcgagtggcgtcgcttaaatatggggagcgtagtggcagcgcccgt
agcccacctcgtagcgaccgtggaagtgctcgtggacgatctcgttcccgctcgccgagg
cctcacaatgttagtggtcgttacgttgtgccgatggagggacctccaagcgagcgtcga
ttgcctcactcgcgctctagatcgcctgttaccttggcgaagcaagtttctcgcgaaggt
ggatacggtacaccatcagacaaggagaaccgtcgtgagtaccgtggcaaatatggccac
agatccctgtcgccagtggatatcagaaaccatgagagttctgttcctgttgaggaggtg
cgtgggcgacctcgtgagcgcggtgagcgcgatggtgcttggatgggatcacgtgaagaa
tctcgtgagcgtcgtggaccgagagatgaaggccgaggacgcggtagcttccaccgcggt
tcgtctccgtccccctcctcctcgtcgaggcgtagccggaaggacgaccaccgctcaagc
gattaccgacgtggaggtaactctcatgaagaagtccgccaatcgtaccgtcgtgaagaa
gaggagcggggtaggatgcccccgccaccgctctctggtggtgtgcttcagctcccccgc
agccacagtcgtagtccaccacgatttggaaagtacgcgggagggtcatccaagagccgt
ccccggtctcgctcccggtcgcccccgcaagacttgaggatgggaagcagttcgcactcg
cgaacaggtggataccgcggacgtgacgaccgtttagtcggcaaccaagttcctgaagac
cggtctgctttccagcccgagcgtccgcgctatgcggatgaccgctccattgccgaggtt
gctcgtgacgaacagcaagaacgtcaacgttttttccagcagcaaaaccagggccgtcga
gactatcatgattctgatttgagtcgctacggtggcggtcgtggcggtggccgtggtgga
ggccgaggacgcggcagcagaagtgagcgaccgcgcccggagtatcaggaccaaccgtct
taccgtggtggtggtcgtaatggagcgatgtaccccccgcagcgccgctctccgtcccct
ctacccccacccagccaccaccgctcgcagtctcctccgccccagtcccgtcggcgctca
ccttcgcctcttccgcctccctctcagcaacgtgaatcctacgagcgtggaaaacgtggc
gagtatgtgccgcgcggccgtgatgctgggtattcccctccgccgtcgccgctcctgcaa
tcctacggccccgggccgtcgggtccgtctgaccgccaggagtttgatttggagatgaca
gaccgagacggtcgtgaacccagccgccacgagcgacgtcaccactcgcgccgtgatcga
agtcgggatgacaagggccaccgcagtcaccgcgaccgtgaccgccgagagaagcgttcg
tctcgccctgagcgctcgctcactccttcacctgttcgtcgggaccttgcctcttcgtca
actggacggaagtcgaatggaccttctccgcgtcggtctttcagccgccgcaatgacggt
gataaccaggcagaggaagcctctggaaaggacaaactagctcgatcgaaggacgaggat
gactcggagccgcagcagaaggagatgaagaatggaggaacgcgcatggcgcgtgacgag
ctgttcgcgggcatggatgatttgaccgtggactatgaagaagacgacgagtaa
DBGET
integrated database retrieval system
