Phytophthora sojae: PHYSODRAFT_555670
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Entry
PHYSODRAFT_555670 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_555670
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHYSODRAFT_555670
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
90S particles
Helicases
PHYSODRAFT_555670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
20663110
NCBI-ProteinID:
XP_009521481
JGI:
Physo3_555670
UniProt:
G4YY25
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MSSTFFGALTLGAKFGGAKFQKDKQQFKQLGKSTGAKKEDKKAAEVDELDFFGFDAVQKP
KEKAPKPRKISVDMVPEWAGNEPASKPRSGEGSKLRRKRKLSAGALEELRMEEEARQQAS
KLLAPPKTKADKRREKRARRRSRTESMGSEAASQKSEVDAESESGDSEEEDEDEDEDEED
AVTLFKSNGEDADEDMADASASKKAKKEAKKAEKKSTATAEQEGVQMLRRQLGIRVSGVS
VPAPITAFADMRMDSSANAQQMKRLLLKNIGRSEYKEPTSVQMQAIPSFLLRRDVLATAP
TGSGKTAAFAIPILANLAAGSGTGSGIRSIVLAPTRDLAVQIRSEFTRLAAGKKLHITLL
SKATAATIASQTKSKMAVDLSTVEMVCLDEADRLLELGFVEQVDEIFAACTHAKVQRAMF
SATMLEGVEELAQTVLRDPVKVAVGTKNAGASTIDQKLVFVGKEEGKLVAMKQLLHDGLQ
LPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLM
SRGMDFKAVNMVINYDFPQSAVSYIHRIGRTGRNGRKGKAVTFFTEDDMVYLRTIANVMK
ISGCEVPDWMLSLKKASMSKRKELLKAPPMRHRINTVSGYDLQKANRLKQMKQAKHKKSG
GESNQSKSQSDKKQDNSTKPAGDGKKTRKKHKKNPKSD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaccttcttcggagcgctgacgctgggcgccaagttcggcggcgccaagttc
cagaaggacaagcagcagttcaagcagctcggcaagtccacgggagccaagaaggaggac
aagaaggcggcggaggtggacgagctggactttttcggcttcgatgcggtccagaagccc
aaggagaaggcgcccaagccgcgcaagatcagcgtcgacatggtgcccgagtgggccggc
aacgagcctgccagcaagccgcgcagtggagagggcagcaagcttcgccgcaagcgcaag
ctgagcgctggcgcgttggaggagctgcgcatggaggaagaggctcggcagcaggcgtcg
aagctgctggcacccccgaagaccaaggctgacaagcgcagggagaagcgagcgcgtcgt
cgctcacgcaccgagtccatgggcagcgaggctgcgtcgcagaagtcggaagtggacgct
gagtccgagtccggagacagcgaggaggaggacgaagatgaagacgaagacgaggaggat
gctgtgactctgttcaagtcaaatggcgaagatgcggacgaggacatggccgatgctagt
gcttcgaagaaggccaagaaggaagccaagaaagcggagaagaagagcactgctaccgct
gagcaagagggagttcagatgcttcgacgccagcttggtatccgtgtgagcggcgtcagc
gtgcctgcgccgatcactgcgttcgctgacatgcgcatggattcgagtgcaaacgcgcag
cagatgaagcgcttgctgttgaagaacatcgggcgctcggagtacaaggagccaacgtcg
gtgcagatgcaagccattcccagctttctgctgcggcgtgatgtgctggccacagcaccc
acgggttccggtaaaactgcagcgtttgccattcctattctcgcgaacttggcagctggt
agtggaactggcagcgggattcgctcgatcgtcctcgctccgactcgtgacctggctgtg
cagattcgctctgagtttacgcgccttgcggctggcaagaagctgcatatcacgctgctt
tccaaggctaccgctgcgacgattgcttcccagaccaagagcaagatggcagtcgatctt
tcgactgttgaaatggtgtgtcttgatgaagccgacagactactggagttgggcttcgtg
gagcaggtggacgaaatttttgctgcttgcactcacgccaaggtccagcgggccatgttt
agtgccacgatgctggaaggagtggaagaactggcccagactgtgctgcgcgaccctgtc
aaggtggctgtgggcacgaaaaacgctggtgccagcacgattgaccagaaacttgtcttc
gtgggcaaggaggaaggaaagcttgtggctatgaagcagctgctgcacgacggacttcag
ctccccgcgctgctcttcgtgcagaacaaggagcgtgctaacgaactctaccacgagttg
ttgtacgatggagtgaacatcggcgccgtccatgcagaccgtaccaaggagcagcgtgac
gacgtgattcgacgtttccgcacgggtgaagtctgggtgctcatttgtaccgacctcatg
agtcgtggtatggacttcaaggccgtcaacatggtcatcaattacgacttcccgcagagc
gctgtgagctacattcaccgcattggtcgcacaggacgaaatggccgcaagggcaaggct
gtcacgttcttcacggaggacgatatggtgtacctgcgtacaatcgctaacgtgatgaag
atctctggctgcgaggttcccgactggatgctctcgctcaagaaggctagtatgtcgaag
aggaaggagctgctgaaggcgcctcctatgcgccaccgtattaacactgtgtcgggatac
gatctccaaaaggcaaaccgtctcaagcagatgaagcaggcgaaacacaaaaagagcggt
ggtgaatccaaccagagcaagtcacagtccgacaagaagcaagacaactccacaaagcct
gcaggcgatggcaagaagacgcgcaaaaagcacaagaagaacccgaagagcgactag
DBGET
integrated database retrieval system
