Phytophthora sojae: PHYSODRAFT_556908
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Entry
PHYSODRAFT_556908 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
psoj
Phytophthora sojae
Pathway
psoj03082
ATP-dependent chromatin remodeling
psoj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PHYSODRAFT_556908
03083 Polycomb repressive complex
PHYSODRAFT_556908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_556908
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PHYSODRAFT_556908
Histone modification proteins
HAT complexes
HATB complex
PHYSODRAFT_556908
HDAC complexes
Sin3A-HDAC complex
PHYSODRAFT_556908
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PHYSODRAFT_556908
PRC2.2
PHYSODRAFT_556908
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PHYSODRAFT_556908
Heterochromatin formation proteins
Other heterochromatin formation proteins
PHYSODRAFT_556908
Chromatin remodeling factors
NuRD complex
PHYSODRAFT_556908
NuRF complex
PHYSODRAFT_556908
NuRF complex (fruit fly)
PHYSODRAFT_556908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
HAD_2
CAF1C_H4-bd
WD40_Prp19
Hydrolase
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
HAD
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
WD40_RFWD3
WD_LRWD1
MIOS_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Hydrolase_like
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
20663196
NCBI-ProteinID:
XP_009519603
JGI:
Physo3_556908
UniProt:
G4YUD1
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MEEDETPAAPTDAENAEGEEEEPDTRLESDEYRAWKKNTPFLYDVVITHSLDWPSLTVQW
LSSTTTESDFSVYELLLGTNTSGAEQNQLLKAKVGLPLDKKRDTPKLNEDTQELGDYNNA
AKRKIKTSLRINHDGEVNRARCMPSDEFIVATKTPQAEVHVFDISKRKSDPEDSSCDPDF
CLLGHDKEGYGLCWDPHEAFHLVSGSDDAIICEWDIRNAGKNVQPLHKYTGHTDVIEDVA
WHRHHPKIFGSVGDDNNMLLWDTRSESYDKPAATVQAHSAEVNCLAFSPSSEYLVATGSS
DKVVNLWDLRRLKTKLHSLEGHGDEIYQLQWSPHHDGVLGSCSADRRLHIWDLAKIGEEQ
TPDDSQDGPSELLFIHAGHTSKVLDFSWHPTEPWVVASVAEDNILHVWQMAEHIYNVEEE
TERQEVAEDELDAAAPKPAVRGAIFDMDGTLLDTEELSRVAIDGVVRQFGKEFTMAMHKA
ILGRPAVEWTSMAITAAGLTEADITPNEMFEQWAERMRDMSDRVEELPGGVEVLSTLHAR
GVPIALATSNSRSVVDAKIKHHPKLFSYFSTIVCGDDPAVKRGKPAPDIFRTASQRLFGL
KEGEDGDQAPHCIVFEDSVNGYTAANAAGMHSIAIPDVRIHTDEAQRVELFGKADEVITS
LTQFQIDNYDWLL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagacgcccgccgcccccaccgacgcagagaacgctgaaggcgaggaa
gaggagcccgacacgcggctggagagcgacgagtacagggcctggaagaaaaacacgccg
ttcctgtacgacgtcgtgataacccactcgctcgactggccgtcgcttactgtgcagtgg
ctgtcctcgaccacgacggagtccgacttctccgtgtatgaactgctcttgggcacgaac
acatcgggggctgagcagaaccagctcttgaaggcgaaagtggggttaccacttgataag
aagcgcgatacacccaagttgaacgaggatacccaagagctgggtgactacaataatgcc
gctaaacgcaagatcaagacttccctgcgcattaaccacgacggagaggtgaatcgagct
cgctgcatgccctcggacgagtttatcgtagccaccaagacgccccaagctgaggtgcac
gtgtttgacatttccaaacgaaagtccgaccccgaagattcgagctgtgacccggacttt
tgtctgttgggtcatgacaaggaagggtacggtctctgctgggatccgcacgaggccttc
cacctcgtgtcgggctcggacgacgctatcatctgcgagtgggatattcgcaacgccggc
aagaacgtgcagccgctgcacaagtacacaggccacaccgatgtgattgaagacgtggcg
tggcacaggcatcaccccaagatcttcggatccgtaggcgacgacaataacatgctgctt
tgggacacgcgatcggagagctacgacaagcccgccgcgaccgtccaggcccactcggca
gaggttaactgcctcgccttcagtccgtccagtgagtacctcgtggcgacaggctcgtcg
gataaagtggtgaatctgtgggacctgcgcaggctgaagaccaagctgcactctctggaa
ggccacggagacgagatctaccagctccagtggtctcctcaccacgacggtgtcctcggt
tcgtgctccgccgaccgccgactgcacatctgggacctcgccaagattggcgaagagcag
acccccgatgactcgcaggacggcccttcggagttgctgttcatccacgccggccacacc
tccaaggtcttggacttctcgtggcacccgaccgagccgtgggtcgtggcctccgttgcc
gaagacaacatcctgcatgtctggcagatggccgagcacatttacaacgttgaagaggag
accgagcggcaggaggtcgccgaggacgagctcgacgccgcagcgcccaagcccgccgtg
cgcggcgccatcttcgacatggacggcacgctgctggacacggaggagctcagccgcgtg
gccatcgacggcgtcgtgcgccagttcggcaaggagttcaccatggccatgcacaaggcc
atcctgggccgccccgccgtcgagtggaccagcatggccatcaccgccgccggtctcacc
gaggcggacatcacgcccaacgagatgttcgagcagtgggccgagcgcatgcgggacatg
tcggaccgcgtcgaggagctcccaggcggcgtcgaggtgctcagcaccctgcacgcgcgg
ggcgtccccatcgcgctggccacgtccaacagccgcagcgtcgtggacgccaagatcaag
caccatcccaagctcttctcgtacttctccaccatcgtgtgcggcgacgaccccgcggtg
aagcgcggcaagcccgcgcccgacattttccgcaccgctagccagcgcctctttggcctc
aaggagggcgaggacggcgaccaggcgccgcactgcatcgtgttcgaggactcggtgaac
ggttacacggctgcgaacgcggcgggcatgcacagcatcgcgatccccgacgtgcgcatc
cacacggatgaggcccagagggtcgaactctttggcaaggcggacgaggtcatcacgtcg
ctcacgcagttccaaattgacaactacgactggctgctgtaa
DBGET
integrated database retrieval system