KEGG   Phytophthora sojae: PHYSODRAFT_556908
Entry
PHYSODRAFT_556908 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
psoj  Phytophthora sojae
Pathway
psoj03082  ATP-dependent chromatin remodeling
psoj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PHYSODRAFT_556908
   03083 Polycomb repressive complex
    PHYSODRAFT_556908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psoj03036]
    PHYSODRAFT_556908
Chromosome and associated proteins [BR:psoj03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     PHYSODRAFT_556908
  Histone modification proteins
   HAT complexes
    HATB complex
     PHYSODRAFT_556908
   HDAC complexes
    Sin3A-HDAC complex
     PHYSODRAFT_556908
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     PHYSODRAFT_556908
    PRC2.2
     PHYSODRAFT_556908
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     PHYSODRAFT_556908
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PHYSODRAFT_556908
  Chromatin remodeling factors
   NuRD complex
    PHYSODRAFT_556908
   NuRF complex
    PHYSODRAFT_556908
   NuRF complex (fruit fly)
    PHYSODRAFT_556908
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz HAD_2 CAF1C_H4-bd WD40_Prp19 Hydrolase Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd HAD Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st WD40_RFWD3 WD_LRWD1 MIOS_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 Hydrolase_like NBCH_WD40
Other DBs
NCBI-GeneID: 20663196
NCBI-ProteinID: XP_009519603
JGI: Physo3_556908
UniProt: G4YUD1
LinkDB
Position
Unknown
AA seq 673 aa
MEEDETPAAPTDAENAEGEEEEPDTRLESDEYRAWKKNTPFLYDVVITHSLDWPSLTVQW
LSSTTTESDFSVYELLLGTNTSGAEQNQLLKAKVGLPLDKKRDTPKLNEDTQELGDYNNA
AKRKIKTSLRINHDGEVNRARCMPSDEFIVATKTPQAEVHVFDISKRKSDPEDSSCDPDF
CLLGHDKEGYGLCWDPHEAFHLVSGSDDAIICEWDIRNAGKNVQPLHKYTGHTDVIEDVA
WHRHHPKIFGSVGDDNNMLLWDTRSESYDKPAATVQAHSAEVNCLAFSPSSEYLVATGSS
DKVVNLWDLRRLKTKLHSLEGHGDEIYQLQWSPHHDGVLGSCSADRRLHIWDLAKIGEEQ
TPDDSQDGPSELLFIHAGHTSKVLDFSWHPTEPWVVASVAEDNILHVWQMAEHIYNVEEE
TERQEVAEDELDAAAPKPAVRGAIFDMDGTLLDTEELSRVAIDGVVRQFGKEFTMAMHKA
ILGRPAVEWTSMAITAAGLTEADITPNEMFEQWAERMRDMSDRVEELPGGVEVLSTLHAR
GVPIALATSNSRSVVDAKIKHHPKLFSYFSTIVCGDDPAVKRGKPAPDIFRTASQRLFGL
KEGEDGDQAPHCIVFEDSVNGYTAANAAGMHSIAIPDVRIHTDEAQRVELFGKADEVITS
LTQFQIDNYDWLL
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggaggaggacgagacgcccgccgcccccaccgacgcagagaacgctgaaggcgaggaa
gaggagcccgacacgcggctggagagcgacgagtacagggcctggaagaaaaacacgccg
ttcctgtacgacgtcgtgataacccactcgctcgactggccgtcgcttactgtgcagtgg
ctgtcctcgaccacgacggagtccgacttctccgtgtatgaactgctcttgggcacgaac
acatcgggggctgagcagaaccagctcttgaaggcgaaagtggggttaccacttgataag
aagcgcgatacacccaagttgaacgaggatacccaagagctgggtgactacaataatgcc
gctaaacgcaagatcaagacttccctgcgcattaaccacgacggagaggtgaatcgagct
cgctgcatgccctcggacgagtttatcgtagccaccaagacgccccaagctgaggtgcac
gtgtttgacatttccaaacgaaagtccgaccccgaagattcgagctgtgacccggacttt
tgtctgttgggtcatgacaaggaagggtacggtctctgctgggatccgcacgaggccttc
cacctcgtgtcgggctcggacgacgctatcatctgcgagtgggatattcgcaacgccggc
aagaacgtgcagccgctgcacaagtacacaggccacaccgatgtgattgaagacgtggcg
tggcacaggcatcaccccaagatcttcggatccgtaggcgacgacaataacatgctgctt
tgggacacgcgatcggagagctacgacaagcccgccgcgaccgtccaggcccactcggca
gaggttaactgcctcgccttcagtccgtccagtgagtacctcgtggcgacaggctcgtcg
gataaagtggtgaatctgtgggacctgcgcaggctgaagaccaagctgcactctctggaa
ggccacggagacgagatctaccagctccagtggtctcctcaccacgacggtgtcctcggt
tcgtgctccgccgaccgccgactgcacatctgggacctcgccaagattggcgaagagcag
acccccgatgactcgcaggacggcccttcggagttgctgttcatccacgccggccacacc
tccaaggtcttggacttctcgtggcacccgaccgagccgtgggtcgtggcctccgttgcc
gaagacaacatcctgcatgtctggcagatggccgagcacatttacaacgttgaagaggag
accgagcggcaggaggtcgccgaggacgagctcgacgccgcagcgcccaagcccgccgtg
cgcggcgccatcttcgacatggacggcacgctgctggacacggaggagctcagccgcgtg
gccatcgacggcgtcgtgcgccagttcggcaaggagttcaccatggccatgcacaaggcc
atcctgggccgccccgccgtcgagtggaccagcatggccatcaccgccgccggtctcacc
gaggcggacatcacgcccaacgagatgttcgagcagtgggccgagcgcatgcgggacatg
tcggaccgcgtcgaggagctcccaggcggcgtcgaggtgctcagcaccctgcacgcgcgg
ggcgtccccatcgcgctggccacgtccaacagccgcagcgtcgtggacgccaagatcaag
caccatcccaagctcttctcgtacttctccaccatcgtgtgcggcgacgaccccgcggtg
aagcgcggcaagcccgcgcccgacattttccgcaccgctagccagcgcctctttggcctc
aaggagggcgaggacggcgaccaggcgccgcactgcatcgtgttcgaggactcggtgaac
ggttacacggctgcgaacgcggcgggcatgcacagcatcgcgatccccgacgtgcgcatc
cacacggatgaggcccagagggtcgaactctttggcaaggcggacgaggtcatcacgtcg
ctcacgcagttccaaattgacaactacgactggctgctgtaa

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