KEGG   Phytophthora sojae: PHYSODRAFT_559644
Entry
PHYSODRAFT_559644 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
psoj  Phytophthora sojae
Pathway
psoj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHYSODRAFT_559644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psoj03041]
    PHYSODRAFT_559644
   03032 DNA replication proteins [BR:psoj03032]
    PHYSODRAFT_559644
Spliceosome [BR:psoj03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PHYSODRAFT_559644
  U2 snRNP components
    PHYSODRAFT_559644
 Complex B
  U1 snRNP components
    PHYSODRAFT_559644
  U4/U6.U5 tri-snRNP components
    PHYSODRAFT_559644
 Complex C
  U2 snRNP components
    PHYSODRAFT_559644
DNA replication proteins [BR:psoj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PHYSODRAFT_559644
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 20663424
NCBI-ProteinID: XP_009525812
JGI: Physo3_559644
UniProt: G4ZH82
LinkDB
Position
Unknown
AA seq 123 aa
MRILTVVFLLPTARRSTGESEFKRVQEDEEEFQKGPLSVLMHSVKNNSQVLINVRNNHKL
LARVKAFDRHCNMVLENVKEMWTEVPKSGKGKKAAKPVNKDRFVSKMFLRGDSVIIVLRN
PHA
NT seq 372 nt   +upstreamnt  +downstreamnt
atgaggattttaaccgtggtctttttgctgccaaccgcgcgccgcagcactggggagagc
gagttcaagcgcgtgcaggaggacgaggaggagttccagaagggcccgctatcggtgctc
atgcacagcgtcaagaacaactcgcaggtgctgatcaacgtgcgcaacaaccacaagctg
ctggcacgcgttaaggccttcgatcgccactgcaacatggtgctggagaacgtcaaggag
atgtggaccgaggtgcccaagtcgggcaagggcaagaaggcggccaagcctgtcaacaag
gaccgcttcgtgagcaaaatgttcctgcgcggagactcggtcatcatcgtgctgcggaac
ccgcacgcctag

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