Phytophthora sojae: PHYSODRAFT_566065
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Entry
PHYSODRAFT_566065 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
psoj
Phytophthora sojae
Pathway
psoj03013
Nucleocytoplasmic transport
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_566065
09122 Translation
03013 Nucleocytoplasmic transport
PHYSODRAFT_566065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_566065
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_566065
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PHYSODRAFT_566065
Spliceosome [BR:
psoj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PHYSODRAFT_566065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Phage_int_SAM_2
Motif
Other DBs
NCBI-GeneID:
20663940
NCBI-ProteinID:
XP_009538190
JGI:
Physo3_566065
UniProt:
G5ADP0
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MAETDGAALKQLQATCKALREEMTALYETRQAGDGRAKQRRWRVLLLLSAMKSGLRDTFL
EADARRVRVQEQKDVAEAHQLQLQNLLYEKDHLLREIRRCRGFSTKEMDKIEFADGDIPI
EVDPDVHRRHLDQLTQELHARKSLQAELKEIKLKIAKVEDATETKQAFLNALPEHLAGIE
AATTGLQKYMGEPVTAQRNRHRAAGVELPTPLYALYCELEAYQTASGEAGKQLTLEIVDS
VGVKHAGAFRKRGFPAALERQEHATPAVKRLKAPSRSPSASVKGATPPRAPSRSPSAKRG
LGGAAQEPESGEIVAAHTAEKLLELRPHASPSEDEEAKEESSESKHPHHEQEENADVTHV
PAQTLWKPHAKALQLTVSVAVPMNADKSGAAAKTGSFTVMFQYFPVAKVVTAEVVKTVPA
SFNHGSHQRSILMNLFPGDDGLTVPHLAVNYAFQEDNEERAEVEFPANATCRPYYWAQWI
CGLDPMKRPDPSEMEVDATEEKPRRRPEPSVRNVMSQLVKRFVATAVLMKHLDQLAKSSG
GSHRSEDGDAHFVHPLARHLFPHEVKTRLEEWKESATPPQDMFQLFRESATSSARPRAEF
HLPTTGCRYFRASFKNGSTHISAMVEISPEYPVRASRFIFQPRSSSSSRAPDKNQFPVYE
NQLKELEIEVNAYYDELILKGCEHNLLLHQLRKIEVCFDVLCNAAADGDADVSLCFGRER
RGKDRRQAMVMDTAAKELRHR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggatggggcggcgctcaagcagctgcaggcgacgtgcaaggcgctgcgc
gaggagatgacggcgctgtacgagacgcggcaggcgggcgacgggcgcgccaagcagcgg
cgctggcgcgtgctgctgctgctgagcgccatgaagagcggcctgcgcgacaccttcctg
gaggcggacgcgcgccgcgtgcgcgtgcaggagcagaaggacgtggcggaggcgcaccag
ctgcagctgcagaaccttctctatgagaaggaccacctgctgcgcgagatccgccgctgc
cggggcttcagcaccaaggagatggacaagatcgagttcgcggacggagacatccccatc
gaggtggacccggacgtgcaccgccgccacctggaccagctcacgcaggagctgcacgcg
cggaagagtctgcaggcggagctcaaggagatcaagctcaagatcgccaaggtggaggac
gccacggagaccaagcaggcgttcttgaacgcgctgcccgagcacttggcgggcattgag
gcggccaccacggggctgcagaagtacatgggggagccggtgacggcgcagcgcaacaga
catcgtgcggctggggtggagctgcccaccccgctctacgcgctgtactgcgagctggag
gcttaccagactgctagtggtgaggcgggcaagcagttgacgctggagatcgtggactcg
gtgggcgtgaagcacgcgggcgcgttccggaagcgcggattcccggctgcgctggagcga
caggagcatgcaacccctgcggtgaagagactcaaggcgccctcacgttcgccctcggcc
agtgtgaaaggagcgacgccgccgcgcgcgccgtctcgctcgccgtcagcgaaacgtgga
ctgggtggcgcggctcaggagcctgagagcggggagattgtggcagcccacactgctgag
aaactgctagagctgaggccgcatgcgtccccttcagaggatgaggaggccaaggaggag
agctctgagtccaagcaccctcaccacgagcaggaggaaaacgcggatgtcacgcatgtg
ccggcgcaaaccctgtggaagccgcacgcaaaggccctgcagctgactgtatcggttgca
gtgccaatgaatgctgacaagagcggagctgcagccaagacgggctcgttcactgtgatg
ttccagtacttccccgtggccaaggtggttaccgctgaggttgtgaagacggtccccgct
agctttaaccacggcagccaccagagaagcatcctgatgaacctgttcccaggcgacgac
ggactcaccgtgccccatctggccgtaaactacgctttccaggaagacaacgaggagcgc
gcggaggtggagttcccagcgaacgcaacctgccggccgtactactgggcccagtggatc
tgcggcctggaccctatgaagcggccagacccatccgagatggaggtcgatgccacggaa
gagaagcctcgtcgtcgaccggagccttcggtgcgtaatgttatgagccagctcgtgaag
cgttttgttgctactgccgtgcttatgaagcacttggatcagttggcaaagtctagcggt
ggttctcaccggtcagaagatggcgatgcacacttcgtacacccactagcacgtcacttg
ttcccacatgaagtgaagactcgacttgaggagtggaaggagagcgcgacgccaccgcaa
gacatgttccagcttttcagagagagcgctacgtcttcagcccgccctcgtgccgagttt
cacctcccgacgactggctgccgctacttccgtgccagcttcaagaatggcagcacgcac
atctccgctatggtcgaaatctcgccggagtacccggttcgcgcttcacgtttcatcttc
cagccgcgctcgtcgtcgagcagcagagctccagacaagaaccagttccccgtttacgag
aaccagctgaaggagcttgagatcgaggtgaacgcgtactatgacgagttaatccttaag
ggctgcgagcacaacctgcttctccaccaacttcgcaagatcgaagtgtgtttcgacgtg
ctgtgcaacgccgcagctgacggcgacgccgacgtctctctctgctttggccgtgaacgt
cgcggcaaggaccgacgccaagccatggtcatggacaccgccgccaaggagctgcgccac
cggtag
DBGET
integrated database retrieval system