Candidatus Phytoplasma solani: S284_00270
Help
Entry
S284_00270 CDS
T02881
Symbol
polC1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psol
Candidatus Phytoplasma solani
Pathway
psol03030
DNA replication
psol03430
Mismatch repair
psol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
S284_00270 (polC1)
03430 Mismatch repair
S284_00270 (polC1)
03440 Homologous recombination
S284_00270 (polC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psol03032
]
S284_00270 (polC1)
03400 DNA repair and recombination proteins [BR:
psol03400
]
S284_00270 (polC1)
Enzymes [BR:
psol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
S284_00270 (polC1)
DNA replication proteins [BR:
psol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
S284_00270 (polC1)
DNA repair and recombination proteins [BR:
psol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
S284_00270 (polC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
DUF7006
Motif
Other DBs
NCBI-ProteinID:
CCP87964
LinkDB
All DBs
Position
24069..26783
Genome browser
AA seq
904 aa
AA seq
DB search
MRGVFYLQSFYSLLQSLNSVEKLVITAKENNYDFVALSDESNLYGMLSFIHLCQKHQIKP
ILGIKINLLWDNKVGELLVYAQNDKGIKNLIQLATFVKLEEQNNISLDKIKALGKNLFII
VTGFSPLFEKIFVSDQKDYFSQLLQQLKSVFTEVFLGISFQSFFLEQLNDNIFDFGSHFK
IPCLPVHKTNYETPKAKETHQILAKMENKPLDSELDLSFLTKNEFDRIYQKYPQIIEQTK
ELITKINYQTFFPNKFQLPSYLDFLENQEAIPNRKNSKQYLKKIATQGLKKFIKPKDLAY
DKYKKRLDQELTIINDLNYQNYFLIVSDLVKYAKKNDILVGPGRGSSSGSLVCFCLEITE
IDPLKYDLIFERFLNSQRKTMPDIDLDFPDNKREKVIEYICQKYGLSRVANIITFGRFVT
KKAIIKELIKFKKIKPFQVKYLFDFLDNSQSQDPKILDDKIKDLLQMATFLEGMPRFTGT
HAAGVILSQDELSQSIPLQKSNYLNLFQTQWEASDLEAIGLLKIDFLGLRSLNIIEQIIE
AIKKDHLSFDLLTIPLNDQKTFQLLQTGKTVGIFQLESLKAKMFLQKMKPQTFEDLIALL
ALNRPGPIDSFDLFLQNRKLKGTHKTYFHPLIDDILRPTYGVILYQEQIMQIVAVFAKYT
LNEADLFRRAISKKDKNILLQEKTHFLTKSQQEGHDTFLANKIYDYILKFANYGFNKSHS
VAYSLISYRMAYLKTNYFIHFMIALLNDSINDSSQTSVLLKEVAQANITIIKPNVFTSLD
YYYFENNQLFLPLNMIKGVSRNFCHELFKERHKQKFMSFKDFKQRLFTSLNPIILTNLIL
SGALDQMGFNRKTLFYNQDLNEVRYYRFLEHYNLTLHQEFLLHQLKSEETKVFGFDINAC
INKN
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtgttttttatttacaaagtttttattccttgttacaaagtctaaattctgta
gaaaaactagttattacagccaaagaaaataattatgattttgtagctctaagcgatgaa
tctaatttatacggcatgctttctttcatacatttgtgtcaaaagcaccaaataaaacct
attttaggcattaaaatcaatttgttatgggataataaagtaggagaacttttagtttat
gcccaaaatgacaaaggaattaaaaatttaatccaattagccacttttgttaaattagaa
gaacaaaacaacatttctttagacaaaatcaaagctttaggtaaaaatttgtttatcatt
gttaccggtttttctcctttgtttgaaaaaatttttgtcagtgaccaaaaagattatttt
agtcaattgttacaacaattaaaaagtgtttttactgaagtttttttaggaatctctttt
caaagtttttttttagaacaactaaacgataatatctttgattttggttcacacttcaaa
attccttgtctacctgttcacaaaactaattatgaaactcccaaagccaaagaaacacat
caaattttagctaaaatggaaaataaacctctcgattctgaactagatttatctttttta
actaaaaatgagtttgatcgcatttatcaaaagtatccacaaattatcgaacagaccaaa
gaattgattactaaaattaattatcaaactttttttccaaataaattccaattaccttct
tatctagattttttagaaaatcaagaagcaattccgaatagaaaaaattctaagcaatat
ttaaaaaaaattgctactcaagggttaaaaaagtttatcaaaccaaaagatttagcatac
gataaatataaaaaaagattagaccaagaattgactatcatcaatgatcttaattatcaa
aattattttttaattgtcagtgatttagttaaatatgccaaaaaaaacgatattttagtc
ggccctggtcgtggttcttcttctggttctttagtatgtttctgtcttgaaattacagaa
attgaccctttaaaatatgatcttatttttgaaaggtttttaaactcacaaagaaaaacc
atgcctgatattgaccttgatttccctgataacaaaagagaaaaagtaattgaatatatt
tgtcaaaaatacggcttatctcgtgtagctaatattattacttttggacgttttgtgacc
aaaaaagctatcattaaagaattgattaaatttaaaaaaataaaaccttttcaagtaaag
tatctttttgattttttagataattctcaatcccaagaccccaaaattttagatgataaa
ataaaagatttgttacaaatggcaacttttttagaggggatgccgcgttttaccggaact
cacgctgccggagtcattttaagtcaagatgaattatcccaaagtatccctttacaaaaa
tcaaattatcttaatttattccaaactcaatgggaagcctcagatttagaagcaattggt
ttattaaaaattgattttttaggacttcgcagtcttaacatcatcgaacaaataatagaa
gcaattaagaaagatcatcttagttttgatcttttgacaatcccattaaacgaccaaaaa
acttttcaacttttacaaaccggcaaaaccgtgggcatttttcaattagaatctttgaaa
gcaaaaatgtttttgcaaaaaatgaaacctcaaacttttgaagatttgattgctttatta
gctttaaaccgtccaggtccaatcgattcttttgatttgtttttgcaaaaccgaaaactt
aaaggaacgcataaaacttattttcatcctctaattgacgatattctccgtccaacttat
ggcgtcattctttatcaagaacaaattatgcaaatagtcgctgtttttgctaaatatacc
ttaaatgaagcggatttatttcgaagagccattagtaaaaaagacaaaaatattttgcta
caagaaaaaacacatttccttaccaaaagccaacaagaaggtcatgatacatttttagct
aataaaatttatgattatattttgaaatttgccaattatggttttaacaaaagccatagt
gttgcttattctttaatcagttaccgtatggcttatcttaaaactaattattttattcat
tttatgatcgctttattaaatgattctataaatgattcttcgcaaactagtgttttatta
aaagaagtagcacaagctaatattacgataattaaaccaaatgtttttaccagcttagat
tattattattttgaaaataatcaactgtttttgcctttaaatatgatcaaaggagtaagt
cgtaatttttgccacgaattattcaaagaacgtcacaaacaaaaatttatgtctttcaaa
gattttaaacaaagattgtttacctctttgaatccaatcattttgactaacttaattttg
agtggtgctcttgatcaaatgggttttaacagaaaaactttattctataatcaagattta
aacgaagtaagatattatcgttttttagaacattacaaccttactttacaccaagaattt
ttactacatcagctaaaatcagaggagactaaagtttttggtttcgacataaatgcttgt
ataaataaaaattaa
DBGET
integrated database retrieval system
