KEGG   Candidatus Phytoplasma solani: S284_04660
Entry
S284_04660        CDS       T02881                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
psol  Candidatus Phytoplasma solani
Pathway
psol03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    S284_04660 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psol03021]
    S284_04660 (rpoB)
   03400 DNA repair and recombination proteins [BR:psol03400]
    S284_04660 (rpoB)
Enzymes [BR:psol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     S284_04660 (rpoB)
Transcription machinery [BR:psol03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     S284_04660 (rpoB)
DNA repair and recombination proteins [BR:psol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      S284_04660 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 IML1_N PcrA_UvrD_tudor
Other DBs
NCBI-ProteinID: CCP88403
UniProt: A0A421NYQ3
LinkDB
Position
504459..508181
AA seq 1240 aa
MAYKNVKYGKKAERRNYSKIIYDVDLPNLIEIQNQSFNLFLKDGIKELLADFCPIESYNG
DLKIYFDDYYFTGPKYNIEESKTKDISYVVQLFVKTTLENVLTGETKQSNILLTELPLMT
DTGTFIINGTERVVVSQIVRSASVYYASNFDVKLNRNLYSGQVIPSRGAWIEYEEGSKEI
LYVKLDRSKKIPLSNFIYALGFDNKEIIENVFGKNPILNSIFEKESDMDTDNALIELYSK
IRQGEKVPVDTAREFIRTRLFDQKKYDLTVVGRYKFNKKLDLLSRVANTYLAHDFINLET
KEVILPKNEFLTKEKIAILKQNRHFLLQELFDVKHNLENETDEEILTYKRDFQKKELYVK
DNILNVRTGEVIFAKDTLVTAEVINHLRQNIQFLDEKVIKFFLGSKDIYQKELERTAVFN
EILEVYRSKDENDQLYNKVKIIGNDPRETKKHITLSDIIASISYYLNLYENIGHVDDIDH
LGNRRLRLIGELLKNQFRIGLTRAEKNIKDMISVSKFSEVVPGDLVNFTFLTNVIKTFFA
NSRLSQFMDQINPLAELTQKRRVSALGVGGINRDRAGVEVRDVHNSHYGRLCPIETPEGP
SIGLITSLSTYAKVDNYGFIQTPFFKVFVKNDIAQISNEIQYLTADQEKEEVIASAGFSV
NPDNTFKNKKIIARKNGETGIFERHQITYADISPKQIVSIATSSIPFLEHNDASRALMGA
NMQRQAVPLLIPESPIVGTGIEYRAAKDSGSLIIASEDGVVTYVDAQKIVISTKSNQEIE
YVLTNFTKSNQDTLILQKPIVVLGEHIKKGDILVDGPSTFQGELALGRNVTVAFMTWEGY
NYEDAIIISEDLVKNDVYTSIHIDKYEVQTRELKKGSGQEEITREVPNVGADAIKNLDER
GIIIPGSEVKEGDILVGKITPQGNIEPTPYEKLIQIVIGEKAREYKDSSLRVPYGEGGIV
QSVHYFSRKNGDILPSGVNENIRVFIAKKRKINEGDKMAGRHGNKGVISLILPKEDMPFM
ADGTPIDIMLNPLGVPSRMNIGQILEIHLGMAAKQLGIKVATPVFDGVDDFDLKEIMKEA
NLELDGKMVLYDGRTGEPYDNRISVGVMYMIKLSHMVDDKLHARNVGPYTLVTQQPMGGK
VQNGGQRFGEMEVWALYAYGAAHTLQEILTVKSDDIIGRNKTYSAIVQGTSLPKPNIPES
FRVFIKELQSLGLYVELIKTDTKENEVNKSLIDYKKEGYN
NT seq 3723 nt   +upstreamnt  +downstreamnt
atggcttataaaaacgtcaaatatggtaaaaaagcagaacgtcgtaattattcaaaaata
atttatgatgttgatttgccgaatttaattgaaatccaaaatcaatcctttaatttgttt
ttaaaagacggcattaaagaattgttggctgatttttgccctattgaaagttataacggt
gatttaaaaatttattttgacgattattactttactggaccgaaatataatattgaagaa
tcaaaaactaaagatatcagttatgtggtacaattatttgtaaaaactactttagaaaat
gttttaactggcgaaactaaacaaagcaatattttattaaccgaattacctttaatgact
gatactggaacttttattatcaatggcaccgaaagagttgttgtttcgcaaattgttcgt
tctgctagtgtttattatgctagcaattttgatgttaaattaaatcgaaacttatattct
ggtcaagtgatcccttcgcgtggcgcttggattgaatatgaagaaggttcgaaagaaatt
ttatacgttaaacttgatcgttctaaaaaaatacctttatctaattttatttatgcctta
ggttttgataataaagaaattattgaaaatgttttcggcaaaaaccccatccttaattct
atttttgaaaaagaatcagatatggatacagacaatgctttaatcgaattgtattctaaa
attcgtcaaggtgaaaaagtcccagttgatactgcaagagaatttattcgtactagactt
tttgatcaaaaaaaatatgatcttactgttgtaggtagatataagttcaataaaaaactt
gatttattaagtagagtagcaaacacttatttagctcatgactttattaatcttgaaact
aaagaagtgattttacctaaaaatgaatttttaaccaaagaaaaaatcgccatcttaaaa
caaaatcgtcattttttgttacaagagttatttgacgtaaaacataatttagaaaatgaa
accgatgaagaaattttaacttataaaagagactttcaaaaaaaagaattatatgtgaaa
gataatattttaaatgtacgtaccggtgaagtcatctttgctaaagatactttggtaact
gccgaagtgattaatcatttaagacaaaacattcaatttcttgacgaaaaagtaattaaa
tttttcttaggatcaaaagatatttatcaaaaagaattggaacgaactgctgtttttaat
gaaattttagaagtttatcgttctaaagatgaaaatgatcaattatacaataaagtaaaa
attataggaaacgatccgagagaaactaaaaaacacatcactttatcagacatcattgca
agtattagctattatttaaacctttatgaaaatattggtcatgttgatgatatcgatcat
ttaggcaatcgtcgtttaaggttaattggagaattgttgaaaaatcaatttcgcattggt
ttaactagagcggaaaaaaatattaaagatatgatttctgtcagcaaatttagcgaagtt
gtaccaggagatttagttaatttcacgtttttaacaaacgtaattaaaactttttttgcc
aattctcgtttatctcaatttatggatcaaatcaatcctttagcggaactaacccaaaaa
agaagagtttctgctttgggtgttggtggaattaaccgtgatcgtgccggagttgaagtc
agagacgttcataattcgcattatggtagattatgtcccatcgaaactcccgaaggacct
tccattgggttaatcacttcactttctacttatgctaaagttgataattatggttttatc
caaactcccttttttaaagtttttgtaaaaaatgatattgctcaaatttcgaatgaaata
caatatttaacagcggatcaagaaaaagaagaagtaattgcctcagctggtttttctgtc
aatccagataacacttttaaaaataaaaaaataattgctaggaaaaacggtgaaacagga
atttttgaaagacaccaaattacttatgccgatatttctccaaaacaaattgtttcaatc
gccacttcgtcgattccttttttagaacacaatgatgcttctagggctttgatgggggct
aacatgcaacgtcaagcagtccctttattaattcctgaatctccgattgtaggaacagga
attgagtatcgtgctgccaaagactctggttctttaattattgcctccgaagatggcgtt
gttacttatgttgatgcccaaaagattgttatttcaactaaaagtaatcaagaaatagaa
tatgttttaaccaactttactaaatccaatcaagacactttaatcttacaaaagccgatc
gtagttttaggtgaacatattaaaaaaggtgatattttagttgatggtccttcaactttt
caaggtgaattagcccttggtagaaatgtgacagtagcttttatgacttgggaagggtat
aattacgaagatgccatcattatatctgaagatttggttaaaaatgatgtctatacttct
attcatatcgataaatacgaagttcaaacgcgagaattaaaaaaaggtagtggacaagaa
gaaatcactcgtgaagttcctaatgttggtgccgatgctatcaaaaacttggatgaaaga
ggaattattattcccggatccgaagtaaaagaaggtgatattttagtaggtaaaatcact
cctcaaggcaacatcgaacctaccccttacgaaaaattaattcaaatagtaatcggtgaa
aaagcccgcgaatacaaagattcttctttaagagttccttatggcgaaggcgggattgtt
caaagcgttcattatttttctagaaaaaatggcgatattttgccatccggcgttaatgaa
aatattcgtgtctttattgctaaaaaacgtaaaattaacgaaggcgataaaatggctggt
cgtcacggcaacaaaggagtcatctctcttattttaccgaaagaagatatgccttttatg
gcagatggaaccccaattgatattatgttaaaccctttaggcgtccctagtaggatgaat
attggacaaattttagaaattcatttaggaatggccgccaaacaactcggcatcaaagtc
gcgacgcctgtatttgatggtgttgatgactttgaccttaaagaaattatgaaagaagct
aatttagaactcgatggcaaaatggttttatatgacggacgcactggggaaccttatgat
aaccgtatttctgtgggagtgatgtatatgattaaattatcgcatatggtcgatgataaa
ttacatgctcgtaatgtcggcccttacaccttagtgactcaacaaccgatgggtggtaaa
gtgcaaaatggcggtcaaagatttggtgaaatggaagtttgggcgctttatgcttacgga
gcagctcacactttacaagaaattttgacagttaaaagtgatgatattatcggtaggaac
aaaacttatagtgctattgttcaaggaacttctttaccgaaacccaacattccagaaagt
ttccgtgtttttattaaagaattgcaatccttaggattgtatgtagaattaattaaaaca
gacactaaagaaaacgaagttaataaatccttaattgattacaaaaaggaaggttataat
taa

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